Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold122G33312 scaffold122 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G1500 LG-8 - View
Actinidia chinensis Actinidia24437 Lachesis_group27 - View
Actinidia chinensis Actinidia31150 Lachesis_group9 + View
Arabidopsis lyrata AL3G26520 scaffold_3 - View
Arabidopsis lyrata AL1G62620 scaffold_1 + View
Avicennia marina MSTRG.9538 ScioBoG_12795_HRSCAF_12848 - View
Avicennia marina MSTRG.4539 ScioBoG_102837_HRSCAF_103074 + View
Avicennia marina MSTRG.10918 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.22524 ScioBoG_3703_HRSCAF_3719 + View
Arabidopsis thaliana AT1G72360 Integrase-type DNA-binding superfamily protein Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 (HRE1)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: Integrase-type DNA-binding superfamily protein (TAIR:AT2G47520.1)%3B Has 6115 Blast hits to 5780 proteins in 251 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 6076%3B Viruses - 2%3B Other Eukaryotes - 37 (source: NCBI BLink). HYPOXIA RESPONSIVE ERF (ETHYLENE RESPONSE FACTOR) 1 (HRE1)%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: ethylene-responsive element binding protein (TAIR:AT3G16770.1)%3B Has 6097 Blast hits to 5793 proteins in 253 species: Archae - 0%3B Bacteria - 2%3B Metazoa - 0%3B Fungi - 0%3B Plants - 6054%3B Viruses - 2%3B Other Eukaryotes - 39 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT1G53910 related to AP2 12 Encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. Involved in oxygen sensing. related to AP2 12 (RAP2.12)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: DNA-binding%2C integrase-type (InterPro:IPR016177)%2C Pathogenesis-related transcriptional factor/ERF%2C DNA-binding (InterPro:IPR001471)%3B BEST Arabidopsis thaliana protein match is: related to AP2 2 (TAIR:AT3G14230.3)%3B Has 6179 Blast hits to 5848 proteins in 260 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 0%3B Fungi - 0%3B Plants - 6129%3B Viruses - 0%3B Other Eukaryotes - 44 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g29101 ChrC05 + View
Brassica carinata BcaC08g45712 ChrC08 - View
Brassica carinata BcaC08g46692 ChrC08 + View
Brassica carinata BcaB03g14984 ChrB03 + View
Brassica napus C06p35000 C06 - View
Brassica oleracea BolC6t38599H C6 - View
Brassica rapa BraA07t31414Z A07 + View
Camellia sinensis var. sinensis CSS0041210 ethylene response factor 5 [Actinidia deliciosa] Chr15 + View
Capsicum annuum CAN.G790.71 PGAv.1.6.scaffold790 - View
Coffea canephora Cc04_g00840 Putative Ethylene-responsive transcription factor RAP2-12 chr4 + View
Citrus clementina Ciclev10025816m.g scaffold_7 - View
Ceratophyllum demersum CDE07G0376 5 + View
Carpinus fangiana Cfa003469 Cfa01 + View
Carya illinoinensis CiPaw.02G132000 PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED Chr02 + View
Citrullus lanatus ClCG07G014340 Ethylene-responsive transcription factor, putative CG_Chr07 + View
Citrullus lanatus ClCG09G001280 Ethylene-responsive transcription factor 4 CG_Chr09 - View
Chenopodium quinoa AUR62001420 RAP2-2: Ethylene-responsive transcription factor RAP2-2 C_Quinoa_Scaffold_2716 + View
Capsella rubella Carub.0001s4318 PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED scaffold_1 + View
Capsella rubella Carub.0002s1922 PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED scaffold_2 + View
Cucumis sativus L. CsaV3_7G034050 Ethylene-responsive transcription factor chr7 + View
Cucumis sativus L. CsaV3_3G030950 Ethylene-responsive transcription factor chr3 - View
Daucus carota DCAR_007656 hypothetical protein DCARv2_Chr2 - View
Daucus carota DCAR_022654 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv20391 GWHABJS00000019 - View
Durio zibethinus Duzib192G1067 NW_019168037.1 + View
Durio zibethinus Duzib235G1202 NW_019167982.1 - View
Erigeron canadensis ECA232G0570 Conyza_canadensis_scaffold:2 - View
Erythranthe guttata Migut.D00917 scaffold_4 + View
Eutrema salsugineum Thhalv10018945m.g PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED scaffold_9 - View
Gossypium hirsutum Gohir.D06G202200 PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED D06 - View
Gossypium hirsutum Gohir.A06G194500 PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED A06 - View
Helianthus annuus HanXRQChr09g0277201 Probable integrase-type DNA-binding superfamily protein HanXRQChr09 - View
Lupinus albus Lalb_Chr10g0101161 PTHR31190//PTHR31190:SF4 - FAMILY NOT NAMED // ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED Lalb_Chr10 + View
Lonicera japonica Lj5A30T67 GWHAAZE00000005 + View
Lonicera japonica Lj9A537T42 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_0_41681 PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_1_38561 PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED Lsat_1_v8_lg_1 - View
Magnolia biondii MBI13_g01680_MAGBIO AED:0.03 Chr13 + View
Petunia axillaris Peaxi162Scf00207g01542 Ethylene-responsive transcription factor 1 Peaxi162Scf00207 - View
Prunus persica Prupe.3G032300 PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED Pp03 + View
Pisum sativum Psat4g166160 AP2 domain chr4LG4 + View
Quercus lobata QL05p001537 5 + View
Rhododendron simsii Rhsim08G0243000 chr08 - View
Salvia bowleyana SalBow6G0382 GWHASIU00000002 - View
Salvia bowleyana SalBow7G2000 GWHASIU00000005 - View
Salix brachista Sabra03G0042600 GWHAAZH00000003 - View
Simmondsia chinensis Sc10g0007960 GWHAASQ00000010 + View
Simmondsia chinensis Sc15g0000770 GWHAASQ00000015 - View
Sechium edule Sed0014990 LG06 - View
Solanum lycopersicum Solyc12g049560.2 Ethylene-responsive transcription factor (AHRD V3.3 *** A0A2G2ZB67_CAPAN) SL4.0ch12 - View
Solanum lycopersicum Solyc06g063070.3 Ethylene Response Factor A.3 SL4.0ch06 - View
Schrenkiella parvula Sp1g40390 PTHR31190:SF4 - ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF071-RELATED ch1-2 + View
Solanum pennellii Sopen12g024030 encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. | related to AP2 12 (RAP2.12) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: related to AP2 2 Spenn-ch12 - View
Solanum pennellii Sopen06g022520 encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. | related to AP2 12 (RAP2.12) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: related to AP2 2 Spenn-ch06 - View
Solanum pennellii Sopen03g041270 encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.12). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12. | related to AP2 12 (RAP2.12) | FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type , Pathogenesis-related transcriptional factor/ERF, DNA-binding | BEST Arabidopsis thaliana protein match is: related to AP2 2 Spenn-ch03 + View
Solanum tuberosum PGSC0003DMG400028853 Callus-expressing factor ST4.03ch12 - View
Solanum tuberosum PGSC0003DMG400004898 Transcription factor JERF1 ST4.03ch06 + View
Trochodendron aralioides TAR624G1094 group9 + View
Theobroma cacao Thecc.06G128400 Transcription factor JERF1 Chromosome_6 - View
Tarenaya hassleriana THA.LOC104810389 ethylene-responsive transcription factor RAP2-12 NW_010965216.1 - View
Tarenaya hassleriana THA.LOC104812272 ethylene-responsive transcription factor ERF073 NW_010965372.1 - View
Tripterygium wilfordii TWI63G0369 NC_052240.1 + View
Vaccinium macrocarpon vmacro15075 Similar to RAP2-12: Ethylene-responsive transcription factor RAP2-12 (Arabidopsis thaliana OX%3D3702) chr7_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G0809 CM024078.1 - View
Vitis vinifera GSVIVG01016684001 chr9 + View