Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G7410 LG-3 - View
Acer truncatum Atru.chr6.1961 chr6 + View
Actinidia chinensis Actinidia08920 Lachesis_group2 - View
Arabidopsis lyrata AL8G25110 scaffold_8 - View
Avicennia marina MSTRG.11208 ScioBoG_14204_HRSCAF_14270 + View
Avicennia marina MSTRG.4638 ScioBoG_102837_HRSCAF_103074 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.C9ICWX PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC arahy.Tifrunner.gnm1.Arahy.18 - View
Arabidopsis thaliana AT5G50920 CLPC homologue 1 Encodes a protein that is similar to ATP-dependent Clp protease ATP-binding subunit / ClpC. Involved in protein import into the chloroplast. May provide ATP source that drives the TIC (Translocon at the Inner envelope membrane of Chloroplasts) translocation machinery. Association of Hsp93 with the inner envelope membrane through its N domain is important for the functions of Hsp93 in vivo. CLPC homologue 1 (CLPC1)%3B FUNCTIONS IN: ATP-dependent peptidase activity%2C ATPase activity%2C ATP binding%3B INVOLVED IN: protein import into chloroplast stroma%2C regulation of chlorophyll biosynthetic process%2C protein targeting to chloroplast%2C chloroplast organization%3B LOCATED IN: in 8 components%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Clp ATPase%2C C-terminal (InterPro:IPR019489)%2C ATPase%2C AAA-type%2C core (InterPro:IPR003959)%2C ATPase%2C AAA-2 (InterPro:IPR013093)%2C ATPase%2C AAA+ type%2C core (InterPro:IPR003593)%2C Chaperonin clpA/B (InterPro:IPR001270)%2C Chaperonin ClpA/B%2C conserved site (InterPro:IPR018368)%2C UvrB/UvrC protein (InterPro:IPR001943)%2C Clp%2C N-terminal (InterPro:IPR004176)%3B BEST Arabidopsis thaliana protein match is: Clp ATPase (TAIR:AT3G48870.2)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC01g06068 ChrC01 + View
Brassica carinata BcaC01g06108 ChrC01 - View
Brassica napus C03p19260 C03 - View
Brassica napus A03p16380 A03 - View
Brassica oleracea BolC3t14312H C3 - View
Brassica rapa BraA03t10928Z A03 - View
Camellia sinensis var. sinensis CSS0043420 PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Nicotiana sylvestris] Chr2 + View
Camellia sinensis var. sinensis CSS0021948 unnamed protein product [Coffea canephora] Chr2 - View
Camellia sinensis var. sinensis CSS0007030 PREDICTED: chaperone protein ClpD, chloroplastic-like isoform X2 [Solanum tuberosum] Chr15 - View
Capsicum annuum CAN.G1008.35 PGAv.1.6.scaffold1008 - View
Coffea canephora Cc04_g05560 Chaperone protein ClpD, chloroplastic chr4 - View
Citrus clementina Ciclev10030757m.g scaffold_4 + View
Cardamine hirsuta CARHR257340 Chaperone protein ClpB 1 Chr8 + View
Cucumis melo MELO3C026162.2 ATP-dependent clp protease chr02 - View
Corchorus olitorius COL.COLO4_37290 Chaperonin ClpA/B AWUE01023871.1 + View
Capsella rubella Carub.0008s1093 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) scaffold_8 - View
Daucus carota DCAR_016324 hypothetical protein DCARv2_Chr5 - View
Davidia involucrata Dinv23248 GWHABJS00000019 + View
Erythranthe guttata Migut.I00650 scaffold_9 - View
Eutrema salsugineum Thhalv10010143m.g PF00004//PF02151//PF07728//PF10431 - ATPase family associated with various cellular activities (AAA) (AAA) // UvrB/uvrC motif (UVR) // AAA domain (dynein-related subfamily) (AAA_5) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) scaffold_16 + View
Eutrema salsugineum Thhalv10012591m.g PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC scaffold_2 - View
Gossypium hirsutum Gohir.D07G049900 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) D07 - View
Glycine max Glyma.04G200400 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Gm04 - View
Glycine max Glyma.05G201100 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Gm05 + View
Glycine max Glyma.06G162200 PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Gm06 - View
Gossypium raimondii Gorai.001G053000 Chr01 - View
Helianthus annuus HanXRQChr16g0498881 Putative clpA/B family; UVR domain; P-loop containing nucleoside triphosphate hydrolase; ClpA/B, conserved site 2 HanXRQChr16 - View
Lupinus albus Lalb_Chr12g0202421 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Lalb_Chr12 - View
Lupinus albus Lalb_Chr13g0297011 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Lalb_Chr13 + View
Lotus japonicus Lj1g0019828 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) chr1 - View
Lonicera japonica Lj5A84T53 GWHAAZE00000005 - View
Malus domestica MD14G1148700 CLPC homologue 1 Chr14 + View
Manihot esculenta Manes.14G042400 Chromosome14 - View
Medicago truncatula Medtr3g098310 ATP-dependent Clp protease chr3 - View
Nicotiana tabacum Nitab4.5_0000976g0270 Clp, N-terminal, P-loop containing nucleoside triphosphate hydrolase, ATPase, AAA-2, Double Clp-N motif, ClpA/B, conserved site 2, Clp ATPase, C-terminal, ATPase, AAA-type, core, AAA+ ATPase domain, ClpA/B, conserved site 1 Nitab4.5_0000976 + View
Petunia axillaris Peaxi162Scf00314g00835 ATP-dependent Clp protease ATP-binding subunit clpA homolog, chloroplastic Peaxi162Scf00314 + View
Populus trichocarpa Potri.015G110000 PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Chr15 + View
Phaseolus vulgaris Phvul.009G159300 PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Chr09 + View
Rosa chinensis RcHm_v2.0_Chr7g0188241 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim08G0200500 chr08 + View
Rhododendron simsii Rhsim12G0180500 chr12 - View
Salix brachista Sabra15G0132100 GWHAAZH00000015 + View
Simmondsia chinensis Sc04g0000250 GWHAASQ00000004 + View
Solanum lycopersicum Solyc03g117950.3 ATP-dependent Clp protease ATP-binding subunit-like protein chloroplastic (AHRD V3.3 *** A0A2P6U503_CHLSO) SL4.0ch03 - View
Schrenkiella parvula Sp6g13090 K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) ch6-6 - View
Solanum pennellii Sopen03g036850 ATP-dependent Clp protease regulatory subunit | EARLY RESPONSIVE TO DEHYDRATION 1 (ERD1) | FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding | INVOLVED IN: response to water deprivation | LOCATED IN: chloroplast stroma, chloroplast, chloroplast envelope | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Clp ATPase, C-terminal , ATPase, AAA+ type, core , ATPase, AAA-2 , ATPase, AAA-type, core , Chaperonin clpA/B , Chaperonin ClpA/B, conserved site , Clp, N-terminal | BEST Arabidopsis thaliana protein match is: CLPC homologue 1 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400014225 ERD1 protein, chloroplast ST4.03ch03 - View
Theobroma cacao Thecc.03G143800 Clp ATPase Chromosome_3 + View
Tarenaya hassleriana THA.LOC104825035 chaperone protein ClpC1%2C chloroplastic NW_010966986.1 - View
Tarenaya hassleriana THA.LOC104798922 chaperone protein ClpC1%2C chloroplastic-like NW_010968505.1 - View
Tripterygium wilfordii TWI23G0413 NC_052239.1 + View
Tripterygium wilfordii TWI39G0664 NC_052250.1 - View
Vaccinium macrocarpon vmacro19092 Similar to CLPD: Chaperone protein ClpD, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View