Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold32G13179 scaffold32 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G16050 LG-6 - View
Aethionema arabicum Aa31LG8G13730 LG-8 + View
Aethionema arabicum Aa31LG7G14900 LG-7 - View
Aethionema arabicum Aa31LG2G15970 LG-2 + View
Acer truncatum Atru.chr5.3050 chr5 - View
Actinidia chinensis Actinidia00537 Lachesis_group12 + View
Actinidia chinensis Actinidia17806 Lachesis_group7 - View
Actinidia chinensis Actinidia27887 Lachesis_group16 - View
Arabidopsis lyrata AL7G16660 scaffold_7 + View
Arabidopsis lyrata AL4G10780 scaffold_4 + View
Arabidopsis lyrata AL3G52500 scaffold_3 - View
Arabidopsis lyrata AL7G11160 scaffold_7 + View
Avicennia marina MSTRG.27690 ScioBoG_94932_HRSCAF_95134 + View
Avicennia marina MSTRG.5403 ScioBoG_102838_HRSCAF_103081 - View
Avicennia marina MSTRG.20070 ScioBoG_26180_HRSCAF_26306 + View
Avicennia marina MSTRG.16818 ScioBoG_19743_HRSCAF_19834 - View
Amaranthus hybridus Ah.01g019220 40S ribosomal protein S25 AmaHy_arrow1_Scaffold_1 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.16MNR3 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.HF8X40 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT4G34555 Ribosomal protein S25 family protein Ribosomal protein S25 family protein%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT2G21580 Ribosomal protein S25 family protein Ribosomal protein S25 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C ribosome%2C plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G39200.1)%3B Has 687 Blast hits to 687 proteins in 237 species: Archae - 21%3B Bacteria - 0%3B Metazoa - 282%3B Fungi - 141%3B Plants - 145%3B Viruses - 0%3B Other Eukaryotes - 98 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT2G16360 40S ribosomal protein S25 Ribosomal protein S25 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: in 6 components%3B EXPRESSED IN: 12 plant structures%3B EXPRESSED DURING: 6 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT4G34555.1)%3B Has 650 Blast hits to 650 proteins in 221 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 278%3B Fungi - 134%3B Plants - 144%3B Viruses - 0%3B Other Eukaryotes - 94 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT4G39200 Ribosomal protein S25 family protein Ribosomal protein S25 family protein%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translation%3B LOCATED IN: cytosolic small ribosomal subunit%2C cytosolic ribosome%2C ribosome%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 (InterPro:IPR004977)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein (TAIR:AT2G21580.1)%3B Has 691 Blast hits to 691 proteins in 239 species: Archae - 24%3B Bacteria - 0%3B Metazoa - 283%3B Fungi - 141%3B Plants - 145%3B Viruses - 0%3B Other Eukaryotes - 98 (source: NCBI BLink). Chr4 + View
Brassica carinata BcaNung02350 Contig840 - View
Brassica carinata BcaB03g12252 ChrB03 + View
Brassica carinata BcaC07g41135 ChrC07 - View
Brassica carinata BcaC02g08783 ChrC02 - View
Brassica carinata BcaNung01274 Contig480 - View
Brassica napus A01p00280 A01 + View
Brassica napus C03p77700 C03 + View
Brassica napus A09p58110 A09 - View
Brassica napus C08p41380 C08 - View
Brassica napus A08p23740 A08 - View
Brassica napus A04p16230 A04 + View
Brassica napus C04p50700 C04 + View
Brassica napus C01p00400 C01 + View
Brassica napus A03p45750 A03 - View
Brassica oleracea BolC3t20027H C3 + View
Brassica oleracea BolC1t00045H C1 + View
Brassica oleracea BolC4t26667H C4 + View
Brassica rapa BraA09t41199Z A09 - View
Brassica rapa BraA04t17262Z A04 + View
Brassica rapa BraA08t34326Z A08 - View
Brassica rapa BraA01t00035Z A01 + View
Beta vulgaris EL10Ac9g21702 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0040094 hypothetical protein CICLE_v10029627mg [Citrus clementina] Chr3 + View
Cicer arietinum L. Ca_20901_v3 Ca_LG6_v3 - View
Coffea canephora Cc02_g17330 40S ribosomal protein S25-2 chr2 + View
Citrus clementina Ciclev10029627m.g scaffold_8 - View
Cardamine hirsuta CARHR112530 40S ribosomal protein S25-4 Chr4 + View
Cardamine hirsuta CARHR106570 40S ribosomal protein S25 Chr3 - View
Cardamine hirsuta CARHR242850 40S ribosomal protein S25-4 Chr7 + View
Cardamine hirsuta CARHR247520 40S ribosomal protein S25-4 Chr7 - View
Carya illinoinensis CiPaw.05G066800 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr05 - View
Carya illinoinensis CiPaw.06G134000 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr06 + View
Chenopodium quinoa AUR62011297 RPS25: 40S ribosomal protein S25 C_Quinoa_Scaffold_3333 - View
Chenopodium quinoa AUR62016761 RPS25: 40S ribosomal protein S25 C_Quinoa_Scaffold_3670 + View
Capsella rubella Carub.0004s0061 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) scaffold_4 + View
Capsella rubella Carub.0007s0111 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) scaffold_7 + View
Capsella rubella Carub.0007s0574 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) scaffold_7 + View
Daucus carota DCAR_003662 hypothetical protein DCARv2_Chr1 + View
Daucus carota DCAR_001565 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv23500 GWHABJS00000005 + View
Davidia involucrata Dinv42050 GWHABJS00000002 - View
Durio zibethinus Duzib132G0966 NW_019167915.1 + View
Durio zibethinus Duzib052G1062 NW_019167849.1 - View
Durio zibethinus Duzib248G1464 NW_019168048.1 - View
Eucalyptus grandis Eucgr.I01282 Chr09 - View
Erythranthe guttata Migut.B00220 scaffold_2 + View
Erythranthe guttata Migut.N01250 scaffold_14 - View
Eutrema salsugineum Thhalv10023150m.g K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) scaffold_11 + View
Eutrema salsugineum Thhalv10026627m.g scaffold_1 + View
Eutrema salsugineum Thhalv10026626m.g K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) scaffold_1 - View
Fragaria x ananassa FAN27G2378 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Fvb2-1 - View
Fragaria vesca FvH4_2g09230 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Fvb2 + View
Gossypium hirsutum Gohir.A12G029901 PF03297 - S25 ribosomal protein (Ribosomal_S25) A12 - View
Gossypium hirsutum Gohir.A01G004400 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) A01 + View
Gossypium hirsutum Gohir.D02G217000 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) D02 - View
Gossypium hirsutum Gohir.A13G033400 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) A13 + View
Gossypium hirsutum Gohir.D13G031300 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) D13 + View
Gossypium hirsutum Gohir.D12G029200 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) D12 - View
Gossypium hirsutum Gohir.A03G195900 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) A03 - View
Gossypium hirsutum Gohir.D01G004400 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) D01 + View
Glycine max Glyma.12G041300 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Gm12 + View
Glycine max Glyma.06G011000 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Gm06 + View
Glycine max Glyma.04G011100 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Gm04 + View
Glycine max Glyma.11G115400 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Gm11 + View
Gossypium raimondii Gorai.013G035700 Chr13 + View
Gossypium raimondii Gorai.005G245000 Chr05 - View
Gossypium raimondii Gorai.008G029900 Chr08 - View
Gossypium raimondii Gorai.002G005300 Chr02 + View
Helianthus annuus HanXRQChr12g0376191 Probable ribosomal protein S25 family protein HanXRQChr12 - View
Hydrangea macrophylla Hma1.2p1_0066F.1_g036230 Hma1.2p1_0066F.1 + View
Lupinus albus Lalb_Chr03g0025541 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Lalb_Chr03 + View
Lupinus albus Lalb_Chr08g0246661 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Lalb_Chr08 - View
Lupinus albus Lalb_Chr23g0265351 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Lalb_Chr23 + View
Lupinus albus Lalb_Chr19g0138751 PF03297 - S25 ribosomal protein (Ribosomal_S25) Lalb_Chr19 - View
Lupinus albus Lalb_Chr01g0002421 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Lalb_Chr01 + View
Lotus japonicus Lj1g0010638 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) chr1 - View
Lactuca sativa Lsat_1_v5_gn_5_119301 Lsat_1_v8_lg_5 - View
Lactuca sativa Lsat_1_v5_gn_9_108360 Lsat_1_v8_lg_9 + View
Manihot esculenta Manes.11G085400 Chromosome11 - View
Medicago truncatula Medtr3g117040 ribosomal protein S25 chr3 - View
Medicago truncatula Medtr4g070600 ribosomal protein S25 chr4 - View
Nelumbo nucifera Nn5g29675 chr5 - View
Olea europaea Oeu020744.1 chr5 + View
Olea europaea Oeu061218.1 scaffold864 - View
Olea europaea Oeu003729.1 chr3 + View
Olea europaea Oeu055601.1 chr15 - View
Petunia axillaris Peaxi162Scf00684g00227 40S ribosomal protein S25 Peaxi162Scf00684 + View
Petunia axillaris Peaxi162Scf00003g01123 Ribosomal protein S25 family protein Peaxi162Scf00003 + View
Punica granatum PGR042G2896 NC_045130.1 + View
Punica granatum PGR142G3009 NC_045128.1 + View
Pisum sativum Psat7g183600 S25 ribosomal protein chr7LG7 + View
Populus trichocarpa Potri.004G157200 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr04 - View
Populus trichocarpa Potri.009G118900 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr09 - View
Phaseolus vulgaris Phvul.009G022600 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr09 + View
Phaseolus vulgaris Phvul.011G043300 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) Chr11 + View
Quercus lobata QL11p044426 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0265071 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim11G0179100 chr11 - View
Rhododendron simsii Rhsim05G0072800 chr05 + View
Salvia bowleyana SalBow3G0083 GWHASIU00000006 + View
Salix brachista Sabra09G0091100 GWHAAZH00000009 - View
Salix brachista Sabra04G0105000 GWHAAZH00000004 - View
Schrenkiella parvula Sp4g00730 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) ch4-1 + View
Schrenkiella parvula Sp3g29590 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) ch3-5 - View
Schrenkiella parvula Sp7g32340 K02975 - small subunit ribosomal protein S25e (RP-S25e, RPS25) ch7-5 - View
Solanum pennellii Sopen10g023380 Ribosomal protein S25 family protein | CONTAINS InterPro DOMAIN/s: Ribosomal protein S25 | BEST Arabidopsis thaliana protein match is: Ribosomal protein S25 family protein Spenn-ch10 - View
Solanum tuberosum PGSC0003DMG400007731 40S ribosomal protein S25 ST4.03ch10 - View
Selenicereus undatus Hund06260 Scaffold_33676 + View
Selenicereus undatus Hund00248 Scaffold_33678 + View
Theobroma cacao Thecc.02G082500 Ribosomal protein S25 family protein Chromosome_2 + View
Tarenaya hassleriana THA.LOC104824817 40S ribosomal protein S25-4 NW_010966933.1 + View
Tarenaya hassleriana THA.LOC104819614 40S ribosomal protein S25-3 NW_010966177.1 - View
Tarenaya hassleriana THA.LOC104807306 40S ribosomal protein S25-3 NW_010963495.1 + View
Tarenaya hassleriana THA.LOC104807742 40S ribosomal protein S25-2-like NW_010963495.1 - View
Trifolium pratense TPR.G32183 Tp57577_TGAC_v2_LG7 - View
Vaccinium macrocarpon vmacro02089 Similar to RPS25: 40S ribosomal protein S25 (Solanum lycopersicum OX%3D4081) chr1_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro17478 Similar to RPS25: 40S ribosomal protein S25 (Solanum lycopersicum OX%3D4081) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1127G0093 CM024076.1 + View
Vigna mungo VMungo1309G2988 CM024072.1 - View
Vitis vinifera GSVIVG01023806001 chr3 + View