Gene: vmacro17478
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro17478
- Transcript Identifier vmacro17478-RA
- Gene Type Coding gene
- Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 28310464-28313418 : negative
Gene Family Information
- ID HOM05D001795
- #Genes/#Species 364/98
- Phylogenetic origin
- ID ORTHO05D001741
- #Genes/#Species 361/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id vmacro17478_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to RPS25: 40S ribosomal protein S25 (Solanum lycopersicum OX=4081)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | ISO | PLAZA Integrative Orthology | structural constituent of ribosome | AT4G39200 |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT4G39200 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G21580 |
| GO:0022626 | ISO | PLAZA Integrative Orthology | cytosolic ribosome | AT4G39200 |
| GO:0022627 | ISO | PLAZA Integrative Orthology | cytosolic small ribosomal subunit | AT4G39200 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G21580 |
| GO:0042788 | ISO | PLAZA Integrative Orthology | polysomal ribosome | AT2G21580 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004977 | Ribosomal protein S25 |
| Mapman id | Description |
|---|---|
| 17.1.3.1.26 | Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS25 |