Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia18047 Lachesis_group12 + View
Actinidia chinensis Actinidia20520 Lachesis_group25 + View
Arabidopsis lyrata AL3G49690 scaffold_3 - View
Avicennia marina MSTRG.19982 ScioBoG_26180_HRSCAF_26306 + View
Amaranthus hybridus Ah.01g023150 RNA-binding protein 39 (RNA-binding motif protein 39) AmaHy_arrow1_Scaffold_1 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.D340KN PTHR13789//PTHR13789:SF185//PTHR24012//PTHR24012:SF361 - MONOOXYGENASE // FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN // FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE arahy.Tifrunner.gnm1.Arahy.19 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q6L7I5 PTHR13789//PTHR13789:SF185//PTHR24012//PTHR24012:SF361 - MONOOXYGENASE // FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN // FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT2G16940 Splicing factor, CC1-like protein Splicing factor%2C CC1-like%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: mRNA processing%3B LOCATED IN: nucleus%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Splicing factor%2C CC1-like (InterPro:IPR006509)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: Splicing factor%2C CC1-like (TAIR:AT5G09880.1)%3B Has 101521 Blast hits to 50249 proteins in 1917 species: Archae - 88%3B Bacteria - 8818%3B Metazoa - 50214%3B Fungi - 11566%3B Plants - 10292%3B Viruses - 445%3B Other Eukaryotes - 20098 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB08g34678 ChrB08 - View
Beta vulgaris EL10Ac9g21352 PTHR24012//PTHR24012:SF388 - FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE PROTEIN Chr9_EL10_PGA_scaffold8 + View
Camellia sinensis var. sinensis CSS0027399 unnamed protein product [Vitis vinifera] Chr3 + View
Camellia sinensis var. sinensis CSS0037552 PREDICTED: RNA-binding protein 39 isoform X1 [Pyrus x bretschneideri] Chr6 + View
Cannabis sativa CANSAT25G1049 NC_044370.1 + View
Carpinus fangiana Cfa005274 Cfa02 - View
Carya illinoinensis CiPaw.06G120700 K13091 - RNA-binding protein 39 (RBM39, RNPC2) Chr06 + View
Carya illinoinensis CiPaw.05G084300 K13091 - RNA-binding protein 39 (RBM39, RNPC2) Chr05 - View
Citrullus lanatus ClCG02G003960 RNA-binding protein CG_Chr02 + View
Cucumis melo MELO3C013338.2 RNA-binding protein 39 isoform X1 chr01 + View
Carica papaya Cpa.g.sc20.102 supercontig_20 - View
Chenopodium quinoa AUR62013011 RBM39: RNA-binding protein 39 C_Quinoa_Scaffold_1040 + View
Chenopodium quinoa AUR62010021 RBM39: RNA-binding protein 39 C_Quinoa_Scaffold_1257 + View
Davidia involucrata Dinv41926 GWHABJS00000002 - View
Davidia involucrata Dinv14120 GWHABJS00000005 + View
Durio zibethinus Duzib248G1200 NW_019168048.1 - View
Erigeron canadensis ECA233G3575 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.I01450 Chr09 - View
Erythranthe guttata Migut.B00067 scaffold_2 + View
Gossypium hirsutum Gohir.A03G205600 K13091 - RNA-binding protein 39 (RBM39, RNPC2) A03 - View
Gossypium hirsutum Gohir.A01G002100 K13091 - RNA-binding protein 39 (RBM39, RNPC2) A01 + View
Gossypium hirsutum Gohir.D02G226900 PTHR24012//PTHR24012:SF361 - FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE D02 - View
Gossypium hirsutum Gohir.D01G001700 K13091 - RNA-binding protein 39 (RBM39, RNPC2) D01 + View
Glycine max Glyma.10G282400 KOG0124//KOG0147 - Polypyrimidine tract-binding protein PUF60 (RRM superfamily) // Transcriptional coactivator CAPER (RRM superfamily) Gm10 - View
Glycine max Glyma.20G107100 K13091 - RNA-binding protein 39 (RBM39, RNPC2) Gm20 + View
Gossypium raimondii Gorai.002G002300 Chr02 + View
Gossypium raimondii Gorai.005G254800 Chr05 - View
Hydrangea macrophylla Hma1.2p1_0032F.1_g019280 Hma1.2p1_0032F.1 + View
Lupinus albus Lalb_Chr06g0163681 KOG0120//KOG0124//KOG0131 - Splicing factor U2AF, large subunit (RRM superfamily) // Polypyrimidine tract-binding protein PUF60 (RRM superfamily) // Splicing factor 3b, subunit 4 Lalb_Chr06 - View
Lonicera japonica Lj9C395T6 GWHAAZE00000009 - View
Malus domestica MD10G1126500 Splicing factor Chr10 - View
Malus domestica MD05G1123800 Splicing factor Chr05 - View
Manihot esculenta Manes.04G071600 Chromosome04 + View
Olea europaea Oeu015559.3 chr15 + View
Punica granatum PGR142G0364 NC_045128.1 + View
Prunus persica Prupe.8G167600 KOG0120//KOG0131 - Splicing factor U2AF, large subunit (RRM superfamily) // Splicing factor 3b, subunit 4 Pp08 - View
Papaver somniferum PSO541G2584 NC_039363.1 - View
Populus trichocarpa Potri.009G137200 PTHR24012//PTHR24012:SF361//PTHR24012:SF388 - FAMILY NOT NAMED // SPLICING FACTOR, CC1-LIKE // SPLICING FACTOR, CC1-LIKE PROTEIN Chr09 - View
Populus trichocarpa Potri.004G177000 K13091 - RNA-binding protein 39 (RBM39, RNPC2) Chr04 - View
Phaseolus vulgaris Phvul.007G018500 K13091 - RNA-binding protein 39 (RBM39, RNPC2) Chr07 + View
Quercus lobata QL11p050659 11 + View
Rosa chinensis RcHm_v2.0_Chr6g0278641 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim11G0193000 chr11 - View
Salix brachista Sabra04G0118900 GWHAAZH00000004 - View
Simmondsia chinensis Sc08g0002790 GWHAASQ00000008 + View
Sechium edule Sed0025364 LG04 + View
Sapria himalayana SHI05768 scaffold8_16897533 - View
Selenicereus undatus Hund00016 Scaffold_33678 + View
Trochodendron aralioides TAR381G0974 group11 + View
Trochodendron aralioides TAR625G0828 group4 + View
Theobroma cacao Thecc.02G057400 Splicing factor Chromosome_2 + View
Tarenaya hassleriana THA.LOC104819657 RNA-binding protein 39-like NW_010966177.1 - View
Tripterygium wilfordii TWI31G0624 NC_052233.1 + View
Vaccinium macrocarpon vmacro02285 Similar to Rbm39: RNA-binding protein 39 (Mus musculus OX%3D10090) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0946 CM024071.1 - View
Vitis vinifera GSVIVG01023998001 chr3 - View