Gene: SGA_v2.0_scaffold58G20356
General Information
Structural Information
- Species Striga asiatica
- Gene Identifier SGA_v2.0_scaffold58G20356
- Transcript Identifier SGA_v2.0_scaffold58T20356
- Gene Type Coding gene
- Location scaffold58 : 355959-369252 : positive
Gene Family Information
- ID HOM05D002097
- #Genes/#Species 318/100
- Phylogenetic origin
- ID ORTHO05D002248
- #Genes/#Species 304/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- product translation initiation factor 3 (IF-3) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006413 | IEA | InterPro | translational initiation | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0006397 | IEA | InterPro | mRNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003743 | IEA | InterPro | translation initiation factor activity | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR019814 | Translation initiation factor 3, N-terminal |
| IPR000679 | Zinc finger, GATA-type |
| IPR000504 | RNA recognition motif domain |
| IPR036788 | Translation initiation factor 3 (IF-3), C-terminal domain superfamily |
| IPR036787 | Translation initiation factor 3 (IF-3), N-terminal domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR010402 | CCT domain |
| IPR006509 | Splicing factor, RBM39-like |
| IPR013088 | Zinc finger, NHR/GATA-type |
| IPR001288 | Translation initiation factor 3 |
| IPR003954 | RNA recognition motif domain, eukaryote |
| IPR029123 | Splicing factor RBM39, linker |
| Mapman id | Description |
|---|---|
| 15.5.1.3.2 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (C-GATA) |
| 17.7.3.4 | Protein biosynthesis.organelle machinery.translation initiation.initiation factor (IF-3) |