Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold68G22970 scaffold68 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G20 LG-4 - View
Actinidia chinensis Actinidia32717 Lachesis_group27 - View
Actinidia chinensis Actinidia21691 Lachesis_group1 + View
Arabidopsis lyrata AL2G41740 scaffold_2 - View
Avicennia marina MSTRG.4742 ScioBoG_102837_HRSCAF_103074 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X2Q1EE arahy.Tifrunner.gnm1.Arahy.19 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.X9C74S arahy.Tifrunner.gnm1.Arahy.09 - View
Arabidopsis thaliana AT1G79810 Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein Dominant suppressor of det1 phenotypes. Encodes a peroxisomal protein essential for Arabidopsis growth. Inserted directly from the cytosol into peroxisomes. REVERSAL OF THE DET PHENOTYPE 3 (TED3)%3B FUNCTIONS IN: zinc ion binding%3B INVOLVED IN: protein import into peroxisome matrix%2C fatty acid beta-oxidation%2C peroxisome organization%2C photomorphogenesis%3B LOCATED IN: cytosol%2C peroxisome%3B EXPRESSED IN: 26 plant structures%3B EXPRESSED DURING: 16 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C RING-type%2C conserved site (InterPro:IPR017907)%2C Pex%2C N-terminal (InterPro:IPR006845)%2C Zinc finger%2C RING-type (InterPro:IPR001841)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 + View
Camellia sinensis var. sinensis CSS0003033 PREDICTED: uncharacterized protein LOC100251441 [Vitis vinifera] Chr2 - View
Cannabis sativa CANSAT56G3591 NC_044371.1 - View
Coffea canephora Cc04_g02900 FUNCTIONS IN chr4 + View
Citrus clementina Ciclev10026419m.g scaffold_7 + View
Carpinus fangiana Cfa002106 Cfa01 - View
Cardamine hirsuta CARHR074760 Peroxisomal biogenesis factor 2 Chr2 + View
Carya illinoinensis CiPaw.01G234500 Chr01 + View
Carya illinoinensis CiPaw.02G148100 K06664 - peroxin-2 (PEX2, PXMP3) Chr02 + View
Citrullus lanatus ClCG09G001870 Pentatricopeptide repeat-containing family protein CG_Chr09 + View
Citrullus lanatus ClCG07G013190 Peroxisome biogenesis factor 2 CG_Chr07 - View
Cucumis melo MELO3C012977.2 peroxisome biogenesis protein 2 chr04 - View
Capsella rubella Carub.0002s2769 scaffold_2 - View
Cucumis sativus L. CsaV3_3G023830 peroxisome biogenesis protein 2 chr3 + View
Daucus carota DCAR_026336 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv38008 GWHABJS00000006 - View
Durio zibethinus Duzib235G0543 NW_019167982.1 - View
Durio zibethinus Duzib192G0150 NW_019168037.1 + View
Erigeron canadensis ECA234G0421 Conyza_canadensis_scaffold:4 + View
Eucalyptus grandis Eucgr.J02952 Chr10 + View
Erythranthe guttata Migut.D01010 scaffold_4 + View
Eutrema salsugineum Thhalv10018845m.g K06664 - peroxin-2 (PEX2, PXMP3) scaffold_9 - View
Fragaria x ananassa FAN14G2558 Fvb6-1 + View
Fragaria x ananassa FAN09G2948 Fvb6-2 + View
Fragaria vesca FvH4_6g31910 K06664 - peroxin-2 (PEX2, PXMP3) Fvb6 + View
Gossypium hirsutum Gohir.D10G069366 D10 + View
Gossypium hirsutum Gohir.A06G188700 K06664 - peroxin-2 (PEX2, PXMP3) A06 - View
Gossypium hirsutum Gohir.D06G197300 K06664 - peroxin-2 (PEX2, PXMP3) D06 - View
Gossypium hirsutum Gohir.A10G067500 A10 + View
Glycine max Glyma.08G203300 Gm08 + View
Glycine max Glyma.07G018300 Gm07 + View
Gossypium raimondii Gorai.010G229600 Chr10 - View
Gossypium raimondii Gorai.011G073200 Chr11 + View
Helianthus annuus HanXRQChr12g0360831 Probable pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) HanXRQChr12 - View
Lupinus albus Lalb_Chr01g0013051 K06664 - peroxin-2 (PEX2, PXMP3) Lalb_Chr01 - View
Lotus japonicus Lj3g0019237 chr3 + View
Lonicera japonica Lj5C318G10 GWHAAZE00000005 + View
Lonicera japonica Lj5C56G8 GWHAAZE00000005 + View
Lonicera japonica Lj9C509T18 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_1_35361 PF04757//PF07690 - Pex2 / Pex12 amino terminal region (Pex2_Pex12) // Major Facilitator Superfamily (MFS_1) Lsat_1_v8_lg_1 - View
Lactuca sativa Lsat_1_v5_gn_5_131021 K06664 - peroxin-2 (PEX2, PXMP3) Lsat_1_v8_lg_5 - View
Magnolia biondii MBI04_g14938_MAGBIO AED:0.18 Chr04 - View
Malus domestica MD17G1189400 Protein of unknown function Chr17 + View
Manihot esculenta Manes.04G131100 Chromosome04 - View
Petunia axillaris Peaxi162Scf00015g00145 Peroxisome biogenesis factor 2 Peaxi162Scf00015 - View
Punica granatum PGR102G0394 NC_045129.1 - View
Populus trichocarpa Potri.001G186000 K06664 - peroxin-2 (PEX2, PXMP3) Chr01 - View
Populus trichocarpa Potri.003G051400 Chr03 + View
Phaseolus vulgaris Phvul.010G147300 Chr10 + View
Quercus lobata QL05p021357 5 + View
Rhododendron simsii Rhsim12G0201300 chr12 - View
Rhododendron simsii Rhsim08G0224800 chr08 - View
Salix brachista Sabra03G0027500 GWHAAZH00000003 - View
Salix brachista Sabra01G0154100 GWHAAZH00000001 + View
Simmondsia chinensis Sc12g0009520 GWHAASQ00000012 - View
Sechium edule Sed0011260 LG05 - View
Sechium edule Sed0019299 LG06 - View
Sechium edule Sed0010660 LG07 + View
Solanum lycopersicum Solyc03g120510.1 Pentatricopeptide repeat-containing protein at3g46870-like protein (AHRD V3.3 *** A0A2K3P313_TRIPR) SL4.0ch03 - View
Schrenkiella parvula Sp5g35950 K06664 - peroxin-2 (PEX2, PXMP3) ch5-7 - View
Solanum pennellii Sopen03g039390 FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 12 growth stages | BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400002549 Tha8 ST4.03ch03 - View
Solanum tuberosum PGSC0003DMG400016501 Peroxisome assembly protein ST4.03ch06 + View
Selenicereus undatus Hund06642 Scaffold_33676 - View
Selenicereus undatus Hund00658 Scaffold_33678 - View
Tripterygium wilfordii TWI18G0563 NC_052241.1 + View
Tripterygium wilfordii TWI12G0304 NC_052243.1 - View
Vaccinium macrocarpon vmacro18877 Similar to PEX2: Peroxisome biogenesis protein 2 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro16974 Similar to THA8: Protein THYLAKOID ASSEMBLY 8, chloroplastic (Arabidopsis thaliana OX%3D3702) chr4_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0331G0294 CM024078.1 - View
Vitis vinifera GSVIVG01017048001 chr9 + View