Gene: Sopen03g039390
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen03g039390
- Transcript Identifier Sopen03g039390.1
- Gene Type Coding gene
- Location Spenn-ch03 : 73496412-73497098 : negative
Gene Family Information
- ID HOM05D002908
- #Genes/#Species 238/97
- Phylogenetic origin
- ID ORTHO05D009379
- #Genes/#Species 103/82
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen03g039390.1
Descriptions
- Description FUNCTIONS IN: molecular_function unknown | INVOLVED IN: biological_process unknown | LOCATED IN: chloroplast | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 12 growth stages | BEST Arabidopsis thaliana protein match is: Vacuolar sorting protein 9 (VPS9) domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000373 | IEA | InterPro | Group II intron splicing | |
| GO:0009658 | IEA | InterPro | chloroplast organization | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT3G27750 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:1990825 | ISO | PLAZA Integrative Orthology | sequence-specific mRNA binding | AT3G27750 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G27750 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |