Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G16590 LG-1 + View
Aethionema arabicum Aa31LG3G16720 LG-3 + View
Aethionema arabicum Aa31LG6G15080 LG-6 + View
Acer truncatum Atru.chr13.1046 chr13 + View
Actinidia chinensis Actinidia28831 Lachesis_group8 - View
Actinidia chinensis Actinidia30843 Lachesis_group25 - View
Actinidia chinensis Actinidia30811 Lachesis_group28 + View
Actinidia chinensis Actinidia10369 Lachesis_group26 + View
Arabidopsis lyrata AL4G12010 scaffold_4 - View
Arabidopsis lyrata AL8G42990 scaffold_8 - View
Arabidopsis lyrata AL6G20940 scaffold_6 - View
Avicennia marina MSTRG.23370 ScioBoG_3895_HRSCAF_3912 - View
Avicennia marina MSTRG.15700 ScioBoG_19538_HRSCAF_19626 + View
Avicennia marina MSTRG.2593 ScioBoG_102835_HRSCAF_103059 - View
Avicennia marina MSTRG.3746 ScioBoG_102836_HRSCAF_103072 + View
Amaranthus hybridus Ah.02g125870 Cyclin-D4-1 (G1/S-specific cyclin-D4-1) (CycD4 AmaHy_arrow1_Scaffold_2 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.Q1XEB7 PTHR10177:SF213 - CYCLIN-D4-1-RELATED arahy.Tifrunner.gnm1.Arahy.17 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KQ3XMX PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1N1W3S PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.URES5A PTHR10177:SF213 - CYCLIN-D4-1-RELATED arahy.Tifrunner.gnm1.Arahy.08 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.NTSW2M PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 arahy.Tifrunner.gnm1.Arahy.03 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.KQ74R7 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 arahy.Tifrunner.gnm1.Arahy.15 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.TP1Q44 PTHR10177:SF213 - CYCLIN-D4-1-RELATED arahy.Tifrunner.gnm1.Arahy.07 - View
Arabidopsis thaliana AT5G65420 CYCLIN D4;1 Encodes a D-type cyclin CYCD4%3B1 that physically interacts with CDC2A and is expressed during vascular tissue development%2C embryogenesis%2C and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. CYCLIN D4%3B1 (CYCD4%3B1)%3B FUNCTIONS IN: cyclin-dependent protein kinase regulator activity%3B INVOLVED IN: G1 phase of mitotic cell cycle%2C regulation of cell cycle%2C response to sucrose stimulus%2C stomatal lineage progression%3B LOCATED IN: nucleus%3B EXPRESSED IN: 18 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclin%2C C-terminal (InterPro:IPR004367)%2C Cyclin D (InterPro:IPR015451)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin%2C N-terminal (InterPro:IPR006671)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: cyclin d4%3B2 (TAIR:AT5G10440.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT2G22490 Cyclin D2;1 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. Cyclin D2%3B1 (CYCD2%3B1)%3B FUNCTIONS IN: protein binding%2C cyclin-dependent protein kinase regulator activity%3B INVOLVED IN: G1 phase of mitotic cell cycle%2C regulation of cell cycle%2C response to sucrose stimulus%3B LOCATED IN: nucleus%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Cyclin%2C C-terminal (InterPro:IPR004367)%2C Cyclin D (InterPro:IPR015451)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin-related (InterPro:IPR013763)%2C Cyclin%2C N-terminal (InterPro:IPR006671)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: CYCLIN D4%3B1 (TAIR:AT5G65420.1)%3B Has 3365 Blast hits to 3363 proteins in 312 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1602%3B Fungi - 305%3B Plants - 1074%3B Viruses - 0%3B Other Eukaryotes - 384 (source: NCBI BLink). Chr2 - View
Arabidopsis thaliana AT5G10440 cyclin d4;2 Encodes a cyclin involved in cell proliferation during stomatal cell lineage development. cyclin d4%3B2 (CYCD4%3B2)%3B CONTAINS InterPro DOMAIN/s: Cyclin%2C C-terminal (InterPro:IPR004367)%2C Cyclin D (InterPro:IPR015451)%2C Cyclin-like (InterPro:IPR011028)%2C Cyclin%2C N-terminal (InterPro:IPR006671)%2C Cyclin (InterPro:IPR006670)%3B BEST Arabidopsis thaliana protein match is: CYCLIN D4%3B1 (TAIR:AT5G65420.1)%3B Has 2823 Blast hits to 2820 proteins in 293 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 1255%3B Fungi - 334%3B Plants - 962%3B Viruses - 9%3B Other Eukaryotes - 263 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC03g18335 ChrC03 - View
Brassica carinata BcaB08g35075 ChrB08 - View
Brassica carinata BcaC01g02765 ChrC01 + View
Brassica carinata BcaB04g20014 ChrB04 - View
Brassica napus C02p64110 C02 - View
Brassica napus A06p32250 A06 - View
Brassica napus A09p57520 A09 + View
Brassica napus C08p40640 C08 + View
Brassica napus A02p43940 A02 - View
Brassica napus C03p60660 C03 + View
Brassica napus A09p09030 A09 - View
Brassica napus C09p10520 C09 - View
Brassica oleracea BolC3t18321H C3 + View
Brassica oleracea BolC2t12475H C2 - View
Brassica oleracea BolC8t51630H C8 + View
Brassica rapa BraA06t26151Z A06 - View
Brassica rapa BraA09t41143Z A09 + View
Brassica rapa BraA09t36555Z A09 - View
Brassica rapa BraA02t09317Z A02 - View
Camellia sinensis var. sinensis CSS0047916 hypothetical protein JCGZ_15864 [Jatropha curcas] Chr9 - View
Camellia sinensis var. sinensis CSS0023046 cyclin D4 [Camellia oleifera] Chr4 + View
Cannabis sativa CANSAT01G1552 NC_044373.1 - View
Cicer arietinum L. Ca_04540_v3 Ca_LG2_v3 + View
Corylus avellana Haze_15052 Similar to CYCD4-2: Cyclin-D4-2 (Arabidopsis thaliana OX%3D3702) 11 - View
Coffea canephora Cc10_g15620 Cyclin-D4-1 chr10 - View
Coffea canephora Cc07_g14300 Putative Cyclin-D2-1 chr7 + View
Citrus clementina Ciclev10025924m.g scaffold_7 + View
Citrus clementina Ciclev10001581m.g scaffold_5 + View
Carpinus fangiana Cfa013787 Cfa05 - View
Carpinus fangiana Cfa004356 Cfa01 + View
Cardamine hirsuta CARHR279400 Cyclin-D4-1 Chr8 - View
Cardamine hirsuta CARHR113690 Cyclin-D2-1 Chr4 - View
Cardamine hirsuta CARHR202850 cyclin d4 Chr6 + View
Carya illinoinensis CiPaw.07G168000 PTHR10177//PTHR10177:SF213 - CYCLINE // CYCLIN-D4-1-RELATED Chr07 + View
Carya illinoinensis CiPaw.01G047200 PTHR10177:SF234 - CYCLIN-D2-1 Chr01 + View
Carya illinoinensis CiPaw.08G054300 PTHR10177//PTHR10177:SF213 - CYCLINE // CYCLIN-D4-1-RELATED Chr08 - View
Citrullus lanatus ClCG01G018470 Cyclin d, putative CG_Chr01 + View
Citrullus lanatus ClCG08G011510 Cyclin d2 CG_Chr08 - View
Cucumis melo MELO3C007725.2 cyclin-D4-1-like isoform X1 chr08 + View
Carica papaya Cpa.g.sc55.35 supercontig_55 - View
Chenopodium quinoa AUR62019014 CYCD4-1: Cyclin-D4-1 C_Quinoa_Scaffold_3876 + View
Capsella rubella Carub.0006s0891 PTHR10177:SF213 - CYCLIN-D4-1-RELATED scaffold_6 - View
Capsella rubella Carub.0004s0165 scaffold_4 - View
Capsella rubella Carub.0008s2627 PTHR10177:SF213 - CYCLIN-D4-1-RELATED scaffold_8 - View
Cucumis sativus L. CsaV3_2G030100 cyclin-D4-1-like chr2 - View
Cucumis sativus L. CsaV3_6G045120 cyclin-D4-1-like isoform X1 chr6 + View
Daucus carota DCAR_014193 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv44838 GWHABJS00000002 - View
Davidia involucrata Dinv20781 GWHABJS00000021 + View
Davidia involucrata Dinv13624 GWHABJS00000014 + View
Durio zibethinus Duzib147G0167 NW_019168470.1 - View
Durio zibethinus Duzib264G1254 NW_019167960.1 - View
Durio zibethinus Duzib093G0734 NW_019167937.1 - View
Durio zibethinus Duzib187G1498 NW_019167860.1 - View
Durio zibethinus Duzib116G0763 NW_019167949.1 + View
Eucalyptus grandis Eucgr.F02128 Chr06 + View
Erythranthe guttata Migut.K00775 scaffold_11 - View
Erythranthe guttata Migut.H02312 scaffold_8 + View
Eutrema salsugineum Thhalv10000215m.g PTHR10177:SF234 - CYCLIN-D2-1 scaffold_15 - View
Eutrema salsugineum Thhalv10014176m.g PTHR10177:SF213 - CYCLIN-D4-1-RELATED scaffold_2 - View
Eutrema salsugineum Thhalv10004644m.g PTHR10177:SF213 - CYCLIN-D4-1-RELATED scaffold_6 + View
Fragaria x ananassa FAN28G2088 PTHR10177:SF234 - CYCLIN-D2-1 Fvb1-1 - View
Fragaria x ananassa FAN04G2908 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Fvb5-4 + View
Fragaria x ananassa FAN19G1267 PTHR10177:SF234 - CYCLIN-D2-1 Fvb1-4 + View
Fragaria x ananassa FAN23G2189 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 Fvb1-3 + View
Fragaria x ananassa FAN26G1699 PTHR10177:SF234 - CYCLIN-D2-1 Fvb1-2 + View
Fragaria vesca FvH4_1g19970 PTHR10177:SF234 - CYCLIN-D2-1 Fvb1 + View
Gossypium hirsutum Gohir.D05G223900 PTHR10177:SF213 - CYCLIN-D4-1-RELATED D05 + View
Gossypium hirsutum Gohir.A11G205900 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 A11 - View
Gossypium hirsutum Gohir.D11G217600 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 D11 + View
Gossypium hirsutum Gohir.A06G032632 PTHR10177:SF213 - CYCLIN-D4-1-RELATED A06 + View
Gossypium hirsutum Gohir.D06G032500 PTHR10177:SF213 - CYCLIN-D4-1-RELATED D06 + View
Gossypium hirsutum Gohir.D11G054200 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 D11 + View
Gossypium hirsutum Gohir.A05G221200 PTHR10177:SF213 - CYCLIN-D4-1-RELATED A05 + View
Glycine max Glyma.02G040500 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 Gm02 - View
Glycine max Glyma.08G280600 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 Gm08 + View
Glycine max Glyma.01G024700 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 Gm01 + View
Glycine max Glyma.18G145600 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 Gm18 - View
Glycine max Glyma.14G180300 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Gm14 - View
Glycine max Glyma.06G094600 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Gm06 + View
Gossypium raimondii Gorai.009G231300 Chr09 + View
Gossypium raimondii Gorai.008G092100 Chr08 + View
Gossypium raimondii Gorai.007G233600 Chr07 + View
Gossypium raimondii Gorai.007G059300 Chr07 + View
Gossypium raimondii Gorai.010G035800 Chr10 + View
Helianthus annuus HanXRQChr05g0163311 Putative cyclin-like HanXRQChr05 - View
Hydrangea macrophylla Hma1.2p1_0125F.1_g059080 Hma1.2p1_0125F.1 + View
Lupinus albus Lalb_Chr16g0381791 K18810 - cyclin D1/2/4, plant (CYCD1_2_4) Lalb_Chr16 + View
Lupinus albus Lalb_Chr08g0242391 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Lalb_Chr08 - View
Lupinus albus Lalb_Chr05g0228471 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 Lalb_Chr05 - View
Lupinus albus Lalb_Chr05g0216481 K18810 - cyclin D1/2/4, plant (CYCD1_2_4) Lalb_Chr05 + View
Lotus japonicus Lj2g0012686 PTHR10177:SF234 - CYCLIN-D2-1 chr2 + View
Lonicera japonica Lj2C536T6 GWHAAZE00000002 + View
Lonicera japonica Lju188C0T6 GWHAAZE00000040 - View
Lonicera japonica Lj4A271T35 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_6_104761 K18810 - cyclin D1/2/4, plant (CYCD1_2_4) Lsat_1_v8_lg_6 - View
Magnolia biondii MBI06_g42717_MAGBIO AED:0.13 Chr06 - View
Magnolia biondii MBI02_g18285_MAGBIO AED:0.17 Chr02 - View
Malus domestica MD15G1381900 Cyclin D2 Chr15 - View
Malus domestica MD01G1037500 CYCLIN D4 Chr01 - View
Malus domestica MD15G1315400 Cyclin D2 Chr15 + View
Malus domestica MD08G1193300 Cyclin D2 Chr08 - View
Manihot esculenta Manes.02G146700 Chromosome02 + View
Manihot esculenta Manes.12G128000 Chromosome12 + View
Manihot esculenta Manes.18G061100 Chromosome18 + View
Medicago truncatula Medtr5g065830 carboxy-terminal domain cyclin chr5 - View
Medicago truncatula Medtr5g032550 carboxy-terminal domain cyclin chr5 + View
Medicago truncatula Medtr8g068950 carboxy-terminal domain cyclin chr8 + View
Olea europaea Oeu055137.1 scaffold686 - View
Olea europaea Oeu053575.1 chr2 - View
Oryza sativa ssp. japonica Os09g0466100 Cyclin, A/B/D/E domain containing protein. Similar to cDNA clone:001-123-E03, full insert sequence. chr09 + View
Punica granatum PGR042G1371 NC_045130.1 - View
Prunus persica Prupe.1G527900 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Pp01 - View
Prunus persica Prupe.6G196300 Pp06 - View
Pisum sativum Psat4g116360 Cyclin + N-terminal domain chr4LG4 - View
Populus trichocarpa Potri.002G103500 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Chr02 - View
Populus trichocarpa Potri.005G157800 PTHR10177:SF213 - CYCLIN-D4-1-RELATED Chr05 + View
Phaseolus vulgaris Phvul.002G148600 PTHR10177:SF234 - CYCLIN-D2-1 Chr02 + View
Phaseolus vulgaris Phvul.003G289500 PTHR10177:SF234 - CYCLIN-D2-1 Chr03 + View
Quercus lobata QL09p017198 9 - View
Rosa chinensis RcHm_v2.0_Chr7g0237481 RcHm_v2.0_Chr7 + View
Rhododendron simsii Rhsim10G0171600 chr10 - View
Rhododendron simsii Rhsim06G0074000 chr06 + View
Rhododendron simsii Rhsim08G0014800 chr08 - View
Salvia bowleyana SalBow5G0568 GWHASIU00000003 + View
Salix brachista Sabra02G0081100 GWHAAZH00000002 - View
Simmondsia chinensis Sc16g0000450 GWHAASQ00000016 - View
Simmondsia chinensis Sc01g0001040 GWHAASQ00000001 - View
Sechium edule Sed0006143 LG04 - View
Sechium edule Sed0007332 LG10 + View
Sechium edule Sed0026894 LG14 - View
Solanum lycopersicum Solyc11g010460.3 cyclinD4_1 SL4.0ch11 - View
Schrenkiella parvula Sp2g28500 PTHR10177//PTHR10177:SF213 - CYCLINE // CYCLIN-D4-1-RELATED ch2-4 - View
Schrenkiella parvula Sp4g01510 PTHR10177//PTHR10177:SF234 - CYCLINE // CYCLIN-D2-1 ch4-1 - View
Schrenkiella parvula Sp6g33010 PTHR10177//PTHR10177:SF213 - CYCLINE // CYCLIN-D4-1-RELATED ch6-6 + View
Solanum pennellii Sopen05g029820 encodes a D-type cyclin whose transcription level is regulated by sucrose but not phytohormones or nitrate. Protein physically interacts with CDC2A. CycD2 kinase activity is regulated by sequestration of CycD2 protein in a form inaccessible to immunoprecipitation and probably not complexed to CDC2A. | Cyclin D2, 1 (CYCD2, 1) | FUNCTIONS IN: protein binding, cyclin-dependent protein kinase regulator activity | INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal , Cyclin D , Cyclin-like , Cyclin-related , Cyclin, N-terminal , Cyclin | BEST Arabidopsis thaliana protein match is: CYCLIN D4, 1 . Spenn-ch05 + View
Solanum pennellii Sopen11g005240 Encodes a D-type cyclin CYCD4, 1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. | CYCLIN D4, 1 (CYCD4, 1) | FUNCTIONS IN: cyclin-dependent protein kinase regulator activity | INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression | LOCATED IN: nucleus | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal , Cyclin D , Cyclin-like , Cyclin-related , Cyclin, N-terminal , Cyclin | BEST Arabidopsis thaliana protein match is: cyclin d4, 2 . Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400016142 Cyclin D2.1 protein ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG400012900 D2/4-type cyclin ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400014595 Cyclin D2.1 protein ST4.03ch05 + View
Selenicereus undatus Hund16544 Scaffold_33677 + View
Selenicereus undatus Hund14096 Scaffold_33679 + View
Trochodendron aralioides TAR625G0067 group4 + View
Trochodendron aralioides TAR628G1660 group5 - View
Trochodendron aralioides TAR381G0488 group11 + View
Theobroma cacao Thecc.08G068100 D2/4-type cyclin Chromosome_8 - View
Theobroma cacao Thecc.01G092500 Cyclin d4 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104824906 cyclin-D2-1-like NW_010966933.1 - View
Tarenaya hassleriana THA.LOC104798748 cyclin-D4-1-like isoform X1 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104807672 cyclin-D2-1-like NW_010963495.1 + View
Tripterygium wilfordii TWI56G1287 NC_052242.1 + View
Tripterygium wilfordii TWI12G1399 NC_052243.1 - View
Tripterygium wilfordii TWI53G0548 NC_052244.1 - View
Utricularia gibba unitig_748.g8479 unitig_748 + View
Utricularia gibba unitig_32.g10706 unitig_32 - View
Vaccinium macrocarpon vmacro21313 Similar to CYCD4-1: Cyclin-D4-1 (Oryza sativa subsp. japonica OX%3D39947) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro18570 Similar to CYCD4-1: Cyclin-D4-1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro12993 Similar to CYCD4-1: Cyclin-D4-1 (Arabidopsis thaliana OX%3D3702) chr11_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1215G0943 CM024074.1 + View
Vigna mungo VMungo0251G2270 CM024069.1 + View
Vitis vinifera GSVIVG01009139001 chr18 - View