Gene: Sopen11g005240
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen11g005240
- Transcript Identifier Sopen11g005240.1
- Gene Type Coding gene
- Location Spenn-ch11 : 3641237-3643563 : negative
Gene Family Information
- ID HOM05D000231
- #Genes/#Species 1796/99
- Phylogenetic origin
- ID ORTHO05D000132
- #Genes/#Species 1759/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Sopen11g005240.1
Descriptions
- Description Encodes a D-type cyclin CYCD4, 1 that physically interacts with CDC2A and is expressed during vascular tissue development, embryogenesis, and formation of lateral root primordia. Its expression is upregulated early during germination.Involved in stomatal cell lineage proliferation in the hypocotyl. | CYCLIN D4, 1 (CYCD4, 1) | FUNCTIONS IN: cyclin-dependent protein kinase regulator activity | INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression | LOCATED IN: nucleus | EXPRESSED IN: 18 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal , Cyclin D , Cyclin-like , Cyclin-related , Cyclin, N-terminal , Cyclin | BEST Arabidopsis thaliana protein match is: cyclin d4, 2 .
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | Solyc11g010460.3 |
| GO:0010440 | ISO | PLAZA Integrative Orthology | stomatal lineage progression | AT5G10440 |
| GO:0007346 | ISO | PLAZA Integrative Orthology | regulation of mitotic cell cycle | Solyc11g010460.3 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G10440 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G10440 |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT5G10440 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 13.1.1.1.4 | Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCD) |