Gene: AT5G65420

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G65420
  • Transcript Identifier AT5G65420.4
  • Gene Type Coding gene
  • Location Chr5 : 26142300-26143750 : negative

Gene Family Information

  • ID HOM05D000231
  • #Genes/#Species 1796/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G65420.4
  • symbol CYCD4%3B1
  • full_name CYCLIN D4%3B1
  • uniprot Q8LGA1

Descriptions

  • Description CYCLIN D4;1
  • Computational description CYCLIN D4;1 (CYCD4;1); FUNCTIONS IN: cyclin-dependent protein kinase regulator activity; INVOLVED IN: G1 phase of mitotic cell cycle, regulation of cell cycle, response to sucrose stimulus, stomatal lineage progression; LOCATED IN: nucleus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cyclin, C-terminal (InterPro:IPR004367), Cyclin D (InterPro:IPR015451), Cyclin-like (InterPro:IPR011028), Cyclin, N-terminal (InterPro:IPR006671), Cyclin (InterPro:IPR006670); BEST Arabidopsis thaliana protein match is: cyclin d4;2 (TAIR:AT5G10440.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009744
IEP
Gene Ontologyresponse to sucrose1
GO:0010440
IMP
Gene Ontologystomatal lineage progression2
GO:0007049
IEA
GOA Databasecell cycle
GO:0051301
IEA
GOA Databasecell division
GO:0000079
IBA
GOA Databaseregulation of cyclin-dependent protein serine/threonine kinase activity
GO:0044772
IBA
GOA Databasemitotic cell cycle phase transition
GO:0009739
ISO
PLAZA Integrative Orthologyresponse to gibberellin Solyc11g010460.3
GO:0007346
ISO
PLAZA Integrative Orthologyregulation of mitotic cell cycle Solyc11g010460.3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3
GO:0016538
IBA
GOA Databasecyclin-dependent protein serine/threonine kinase regulator activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005634
ISM
Gene Ontologynucleus
GO:0005737
IBA
GOA Databasecytoplasm
GO:0000307
IBA
GOA Databasecyclin-dependent protein kinase holoenzyme complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006671 Cyclin, N-terminal
IPR036915 Cyclin-like superfamily
IPR039361 Cyclin
IPR013763 Cyclin-like
IPR004367 Cyclin, C-terminal domain
Mapman id Description
13.1.1.1.4 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin activities.cyclin (CYCD)