Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG5G22550 | LG-5 | - | View | |
Acer truncatum | Atru.chr8.1858 | chr8 | + | View | |
Amaranthus hybridus | Ah.08g211720 | AmaHy_arrow1_Scaffold_8 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.145GHR | K11294 - nucleolin (NCL, NSR1) | arahy.Tifrunner.gnm1.Arahy.02 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.J4YCND | K11294 - nucleolin (NCL, NSR1) | arahy.Tifrunner.gnm1.Arahy.12 | + | View |
Brassica napus | C03p24140 | C03 | - | View | |
Brassica napus | A03p20540 | A03 | - | View | |
Brassica oleracea | BolC4t28076H | C4 | - | View | |
Camellia sinensis var. sinensis | CSS0012049 | PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Nelumbo nucifera] | Chr4 | + | View |
Camellia sinensis var. sinensis | CSS0024338 | PREDICTED: ribonucleoprotein At2g37220, chloroplastic [Prunus mume] | Chr10 | + | View |
Corylus avellana | Haze_20582 | Similar to CP29B: RNA-binding protein CP29B, chloroplastic (Arabidopsis thaliana OX%3D3702) | 10 | + | View |
Citrus clementina | Ciclev10012331m.g | scaffold_6 | + | View | |
Carpinus fangiana | Cfa017570 | Cfa07 | - | View | |
Carya illinoinensis | CiPaw.09G175100 | K11294 - nucleolin (NCL, NSR1) | Chr09 | + | View |
Carya illinoinensis | CiPaw.10G133300 | K11294 - nucleolin (NCL, NSR1) | Chr10 | + | View |
Citrullus lanatus | ClCG10G020270 | RNA binding protein | CG_Chr10 | + | View |
Cucumis melo | MELO3C009343.2 | 29 kDa ribonucleoprotein, chloroplastic | chr04 | + | View |
Chenopodium quinoa | AUR62040470 | 29 kDa ribonucleoprotein B, chloroplastic | C_Quinoa_Scaffold_3293 | + | View |
Capsella rubella | Carub.0004s1912 | K11294 - nucleolin (NCL, NSR1) | scaffold_4 | - | View |
Cucumis sativus L. | CsaV3_3G035830 | 29 kDa ribonucleoprotein, chloroplastic | chr3 | - | View |
Daucus carota | DCAR_017699 | hypothetical protein | DCARv2_Chr5 | + | View |
Daucus carota | DCAR_014987 | hypothetical protein | DCARv2_Chr4 | + | View |
Davidia involucrata | Dinv37292 | GWHABJS00000021 | + | View | |
Davidia involucrata | Dinv35762 | GWHABJS00000015 | - | View | |
Durio zibethinus | Duzib093G1647 | NW_019167937.1 | + | View | |
Durio zibethinus | Duzib128G0972 | NW_019168481.1 | + | View | |
Erigeron canadensis | ECA238G1210 | Conyza_canadensis_scaffold:6 | - | View | |
Eucalyptus grandis | Eucgr.K01243 | Chr11 | - | View | |
Erythranthe guttata | Migut.J00538 | scaffold_10 | - | View | |
Eutrema salsugineum | Thhalv10017023m.g | KOG0114//KOG0131//KOG0144//KOG4210 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein | scaffold_10 | - | View |
Fragaria x ananassa | FAN09G0494 | K11294 - nucleolin (NCL, NSR1) | Fvb6-2 | + | View |
Fragaria vesca | FvH4_6g16030 | K11294 - nucleolin (NCL, NSR1) | Fvb6 | - | View |
Gossypium hirsutum | Gohir.A04G073600 | K11294 - nucleolin (NCL, NSR1) | A04 | + | View |
Gossypium hirsutum | Gohir.A09G149100 | KOG0131 - Splicing factor 3b, subunit 4 | A09 | + | View |
Gossypium hirsutum | Gohir.D04G112600 | K11294 - nucleolin (NCL, NSR1) | D04 | + | View |
Gossypium hirsutum | Gohir.D09G145000 | KOG0131 - Splicing factor 3b, subunit 4 | D09 | + | View |
Glycine max | Glyma.13G145200 | K11294 - nucleolin (NCL, NSR1) | Gm13 | + | View |
Gossypium raimondii | Gorai.006G166300 | Chr06 | + | View | |
Gossypium raimondii | Gorai.009G416900 | Chr09 | + | View | |
Lupinus albus | Lalb_Chr21g0314911 | K11294 - nucleolin (NCL, NSR1) | Lalb_Chr21 | - | View |
Lupinus albus | Lalb_Chr06g0171541 | K11294 - nucleolin (NCL, NSR1) | Lalb_Chr06 | - | View |
Lupinus albus | Lalb_Chr02g0156091 | KOG0106//KOG0131//KOG0144 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | Lalb_Chr02 | + | View |
Lotus japonicus | Lj5g0003620 | KOG0121//KOG0131//KOG0144 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) | chr5 | + | View |
Lonicera japonica | Lj2C113G9 | GWHAAZE00000002 | - | View | |
Lonicera japonica | Lj3A982T39 | GWHAAZE00000003 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_6_30901 | K11294 - nucleolin (NCL, NSR1) | Lsat_1_v8_lg_6 | + | View |
Malus domestica | MD12G1117600 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr12 | + | View |
Malus domestica | MD04G1096600 | RNA-binding (RRM/RBD/RNP motifs) family protein | Chr04 | + | View |
Manihot esculenta | Manes.08G008000 | Chromosome08 | - | View | |
Manihot esculenta | Manes.09G067800 | Chromosome09 | + | View | |
Nelumbo nucifera | Nn2g10828 | chr2 | - | View | |
Nelumbo nucifera | Nn2g13128 | chr2 | - | View | |
Nicotiana tabacum | Nitab4.5_0000101g0220 | RNA recognition motif domain, Nucleotide-binding, alpha-beta plait | Nitab4.5_0000101 | - | View |
Olea europaea | Oeu045207.1 | chr11 | - | View | |
Petunia axillaris | Peaxi162Scf00488g00813 | Phototropic-responsive NPH3 family protein | Peaxi162Scf00488 | + | View |
Punica granatum | PGR142G4243 | NC_045128.1 | - | View | |
Prunus persica | Prupe.6G235900 | K11294 - nucleolin (NCL, NSR1) | Pp06 | + | View |
Papaver somniferum | PSO339G1818 | NC_039366.1 | + | View | |
Papaver somniferum | PSO339G2666 | NC_039366.1 | - | View | |
Populus trichocarpa | Potri.006G127200 | K11294 - nucleolin (NCL, NSR1) | Chr06 | + | View |
Populus trichocarpa | Potri.016G090700 | K11294 - nucleolin (NCL, NSR1) | Chr16 | - | View |
Quercus lobata | QL07p044273 | 7 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr3g0469771 | RcHm_v2.0_Chr3 | - | View | |
Rhododendron simsii | Rhsim04G0146800 | chr04 | + | View | |
Salvia bowleyana | SalBow3G3574 | GWHASIU00000006 | - | View | |
Salix brachista | Sabra06G0100100 | GWHAAZH00000006 | + | View | |
Salix brachista | Sabra16G0096200 | GWHAAZH00000016 | - | View | |
Simmondsia chinensis | Sc20g0005330 | GWHAASQ00000020 | + | View | |
Sechium edule | Sed0020514 | LG04 | - | View | |
Sechium edule | Sed0024268 | LG02 | + | View | |
Solanum lycopersicum | Solyc10g086150.2 | RNA-binding protein (AHRD V3.3 *** A0A2U1PI86_ARTAN) | SL4.0ch10 | - | View |
Solanum lycopersicum | Solyc09g007850.3 | RNA-binding protein (AHRD V3.3 *** A0A2U1PI86_ARTAN) | SL4.0ch09 | - | View |
Schrenkiella parvula | Sp4g19540 | K11294 - nucleolin (NCL, NSR1) | ch4-6 | - | View |
Solanum pennellii | Sopen09g002690 | 29 kDa ribonucleoprotein A, chloroplast precursor (CP29A) - Nicotiana sylvestris (Wood tobacco), Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, poly(U) RNA binding | INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response | LOCATED IN: in 6 components | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 | Spenn-ch09 | - | View |
Solanum pennellii | Sopen10g035530 | 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B) - Nicotiana sylvestris (Wood tobacco), Encodes a chloroplast RNA binding protein. A substrate of the type III effector HopU1 (mono-ADP-ribosyltransferase). Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds. | RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, poly(U) RNA binding | INVOLVED IN: response to cold, response to abscisic acid stimulus, innate immune response | LOCATED IN: in 6 components | EXPRESSED IN: 26 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: chloroplast RNA-binding protein 29 | Spenn-ch10 | - | View |
Solanum tuberosum | PGSC0003DMG400021562 | Single-stranded DNA binding protein | ST4.03ch09 | + | View |
Trochodendron aralioides | TAR636G3258 | group1 | - | View | |
Theobroma cacao | Thecc.05G061700 | RNA-binding family protein | Chromosome_5 | - | View |
Tripterygium wilfordii | TWI53G1090 | NC_052244.1 | + | View | |
Tripterygium wilfordii | TWI74G0749 | NC_052234.1 | - | View | |
Vitis vinifera | GSVIVG01025697001 | chr8 | + | View |