Gene: Potri.016G090700

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.016G090700
  • Transcript Identifier Potri.016G090700.3
  • Gene Type Coding gene
  • Location Chr16 : 7417104-7418950 : negative

Gene Family Information

  • ID HOM05D000142
  • #Genes/#Species 2580/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.016G090700.v4.1
  • pacid 42809174
  • synonym fgenesh4_pm.C_LG_XVI000330

Descriptions

  • Description K11294 - nucleolin (NCL, NSR1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT2G37220
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT2G37220
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT2G37220

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G37220
GO:0008266
ISO
PLAZA Integrative Orthologypoly(U) RNA binding AT2G37220

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT2G37220
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G37220
GO:0010319
ISO
PLAZA Integrative Orthologystromule AT2G37220
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT2G37220
GO:0009534
ISO
PLAZA Integrative Orthologychloroplast thylakoid AT2G37220
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT2G37220
GO:0009535
ISO
PLAZA Integrative Orthologychloroplast thylakoid membrane AT2G37220

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
16.11.2.1 RNA processing.organelle machinery.plastidial mRNA stabilisation.ribonucleoprotein (CP29)