Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold6G03327 scaffold6 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia16231 Lachesis_group24 + View
Avicennia marina MSTRG.18035 ScioBoG_19834_HRSCAF_19925 + View
Arabidopsis thaliana AT1G55520 TATA binding protein 2 TATA-box binding protein. Required for basal transcription. Acts facilitating the recruitment of TFIID to the promoter%2C which together with the RNA polymerase form the preinitiation complex. TATA binding protein 2 (TBP2)%3B CONTAINS InterPro DOMAIN/s: TATA-box binding (InterPro:IPR000814)%2C Beta2-adaptin/TATA-box binding%2C C-terminal (InterPro:IPR012295)%2C Transcription factor TFIID%2C C-terminal/DNA glycosylase%2C N-terminal (InterPro:IPR012294)%3B BEST Arabidopsis thaliana protein match is: TATA binding protein 1 (TAIR:AT3G13445.1)%3B Has 2123 Blast hits to 1580 proteins in 405 species: Archae - 736%3B Bacteria - 0%3B Metazoa - 578%3B Fungi - 191%3B Plants - 155%3B Viruses - 0%3B Other Eukaryotes - 463 (source: NCBI BLink). Chr1 - View
Brassica carinata BcaC01g01531 ChrC01 - View
Brassica napus C05p54470 C05 - View
Brassica rapa BraA08t32117Z A08 + View
Corylus avellana Haze_22927 Similar to TBP1: TATA-box-binding protein (Glycine max OX%3D3847) 6 + View
Coffea canephora Cc01_g00250 TATA-box-binding protein chr1 - View
Carpinus fangiana Cfa009536 Cfa04 + View
Cardamine hirsuta CARHR045200 TATA-box binding protein Chr1 - View
Carya illinoinensis CiPaw.13G178600 K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Chr13 - View
Capsella rubella Carub.0001s4401 K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) scaffold_1 - View
Davidia involucrata Dinv13486 GWHABJS00000007 - View
Erigeron canadensis ECA233G1438 Conyza_canadensis_scaffold:1 - View
Fragaria x ananassa FAN25G0154 PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb3-1 + View
Fragaria x ananassa FAN16G1873 K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Fvb3-3 - View
Fragaria x ananassa FAN11G0913 K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Fvb3-4 + View
Fragaria x ananassa FAN21G1962 K03120 - transcription initiation factor TFIID TATA-box-binding protein (TBP, tbp) Fvb3-2 - View
Fragaria vesca FvH4_3g45850 PTHR10126//PTHR10126:SF23 - TATA-BOX BINDING PROTEIN // SUBFAMILY NOT NAMED Fvb3 - View
Lonicera japonica Lj1A1137T82 GWHAAZE00000001 + View
Lactuca sativa Lsat_1_v5_gn_6_55920 PTHR10126 - TATA-BOX BINDING PROTEIN Lsat_1_v8_lg_6 - View
Malus domestica MD03G1002100 TATA binding protein 1 Chr03 + View
Nelumbo nucifera Nn7g35830 chr7 + View
Olea europaea Oeu023972.1 chr1 + View
Punica granatum PGR119G0518 NC_045132.1 + View
Rosa chinensis RcHm_v2.0_Chr5g0083961 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim13G0234100 chr13 - View
Trochodendron aralioides TAR633G2813 group2 + View
Vaccinium macrocarpon vmacro09145 Similar to TBP2: TATA-box-binding protein 2 (Zea mays OX%3D4577) chr6_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01025497001 chr6 + View