Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold58G20466 scaffold58 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G14820 LG-1 - View
Acer truncatum Atru.chr5.3131 chr5 + View
Actinidia chinensis Actinidia00568 Lachesis_group12 - View
Actinidia chinensis Actinidia11767 Lachesis_group25 - View
Arabidopsis lyrata AL7G14800 scaffold_7 + View
Avicennia marina MSTRG.16845 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.20050 ScioBoG_26180_HRSCAF_26306 - View
Amaranthus hybridus Ah.01g018990 GATA transcription factor 5 AmaHy_arrow1_Scaffold_1 + View
Aquilegia oxysepala Aqoxy6G02395 CHR06 - View
Aquilegia oxysepala Aqoxy5G01500 CHR05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.LJYJ4M PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 arahy.Tifrunner.gnm1.Arahy.13 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.5U2LX3 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VS8GG1 PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 arahy.Tifrunner.gnm1.Arahy.03 - View
Arabidopsis thaliana AT4G34680 GATA transcription factor 3 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 3 (GATA3)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C NHR/GATA-type (InterPro:IPR013088)%2C Transcription factor%2C GATA%2C plant (InterPro:IPR016679)%2C Zinc finger%2C GATA-type (InterPro:IPR000679)%3B BEST Arabidopsis thaliana protein match is: GATA transcription factor 7 (TAIR:AT4G36240.1)%3B Has 1460 Blast hits to 1422 proteins in 154 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 10%3B Fungi - 551%3B Plants - 835%3B Viruses - 0%3B Other Eukaryotes - 64 (source: NCBI BLink). GATA transcription factor 3 (GATA3)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C NHR/GATA-type (InterPro:IPR013088)%2C Transcription factor%2C GATA%2C plant (InterPro:IPR016679)%2C Zinc finger%2C GATA-type (InterPro:IPR000679)%3B BEST Arabidopsis thaliana protein match is: GATA transcription factor 7 (TAIR:AT4G36240.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT4G36240 GATA transcription factor 7 Encodes a member of the GATA factor family of zinc finger transcription factors. GATA transcription factor 7 (GATA7)%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C NHR/GATA-type (InterPro:IPR013088)%2C Transcription factor%2C GATA%2C plant (InterPro:IPR016679)%2C Zinc finger%2C GATA-type (InterPro:IPR000679)%3B BEST Arabidopsis thaliana protein match is: GATA transcription factor 5 (TAIR:AT5G66320.2)%3B Has 1362 Blast hits to 1315 proteins in 146 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 3%3B Fungi - 522%3B Plants - 778%3B Viruses - 0%3B Other Eukaryotes - 59 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaC01g00884 ChrC01 - View
Brassica carinata BcaB03g11819 ChrB03 - View
Brassica carinata BcaNung00673 Contig324 - View
Brassica napus C01p04130 C01 - View
Brassica napus A01p02500 A01 + View
Brassica napus C03p85590 C03 - View
Brassica napus A01p03820 A01 - View
Brassica napus A08p16670 A08 - View
Brassica oleracea BolC1t00401H C1 - View
Brassica oleracea BolC3t20847H C3 - View
Brassica rapa BraA08t33632Z A08 - View
Beta vulgaris EL10Ac9g21650 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0041287 PREDICTED: GATA transcription factor 5 [Vitis vinifera] Chr1 - View
Camellia sinensis var. sinensis CSS0017616 PREDICTED: GATA transcription factor 5-like [Nicotiana tomentosiformis] Chr3 - View
Capsicum annuum CAN.G170.90 PGAv.1.6.scaffold170 + View
Cannabis sativa CANSAT11G0009 NC_044377.1 - View
Cicer arietinum L. Ca_15340_v3 Ca_LG5_v3 - View
Coffea canephora Cc02_g17010 Putative GATA transcription factor 5 chr2 - View
Citrus clementina Ciclev10028860m.g scaffold_8 + View
Carpinus fangiana Cfa006935 Cfa02 + View
Carpinus fangiana Cfa005096 Cfa02 + View
Cardamine hirsuta CARHR244640 GATA transcription factor 7 Chr7 - View
Carya illinoinensis CiPaw.06G129000 PTHR10071//PTHR10071:SF183 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 7 Chr06 - View
Carya illinoinensis CiPaw.05G073100 PTHR10071//PTHR10071:SF183 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 7 Chr05 + View
Citrullus lanatus ClCG11G003930 GATA transcription factor, putative CG_Chr11 - View
Cucumis melo MELO3C007882.2 GATA transcription factor chr08 + View
Carica papaya Cpa.g.sc150.28 supercontig_150 - View
Chenopodium quinoa AUR62016814 GATA5: GATA transcription factor 5 C_Quinoa_Scaffold_3670 + View
Chenopodium quinoa AUR62010402 GATA5: GATA transcription factor 5 C_Quinoa_Scaffold_1257 - View
Capsella rubella Carub.0007s0400 PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 scaffold_7 + View
Cucumis sativus L. CsaV3_6G046850 GATA transcription factor chr6 + View
Cucumis sativus L. CsaV3_2G015250 GATA transcription factor chr2 + View
Davidia involucrata Dinv23464 GWHABJS00000005 - View
Davidia involucrata Dinv42007 GWHABJS00000002 + View
Durio zibethinus Duzib147G0610 NW_019168470.1 + View
Durio zibethinus Duzib052G1125 NW_019167849.1 + View
Durio zibethinus Duzib132G0859 NW_019167915.1 - View
Durio zibethinus Duzib264G0141 NW_019167960.1 + View
Erigeron canadensis ECA246G1847 Conyza_canadensis_scaffold:8 - View
Eucalyptus grandis Eucgr.J02392 Chr10 + View
Eucalyptus grandis Eucgr.G01722 Chr07 + View
Erythranthe guttata Migut.N01274 scaffold_14 + View
Erythranthe guttata Migut.B00182 scaffold_2 - View
Eutrema salsugineum Thhalv10010566m.g PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED scaffold_16 - View
Eutrema salsugineum Thhalv10026110m.g PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 scaffold_1 + View
Fragaria x ananassa FAN24G1927 PTHR10071//PTHR10071:SF183 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 7 Fvb2-2 - View
Fragaria x ananassa FAN20G1260 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Fvb2-3 - View
Fragaria vesca FvH4_2g10220 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Fvb2 + View
Gossypium hirsutum Gohir.D02G220000 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED D02 + View
Gossypium hirsutum Gohir.A13G030900 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED A13 - View
Gossypium hirsutum Gohir.A11G178600 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED A11 - View
Gossypium hirsutum Gohir.D11G186200 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED D11 - View
Gossypium hirsutum Gohir.A03G198600 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED A03 + View
Gossypium hirsutum Gohir.D13G028900 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED D13 - View
Glycine max Glyma.06G008800 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED Gm06 - View
Glycine max Glyma.12G037700 PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 Gm12 - View
Glycine max Glyma.11G111700 PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 Gm11 - View
Glycine max Glyma.04G008900 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED Gm04 - View
Glycine max Glyma.02G051100 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED Gm02 - View
Gossypium raimondii Gorai.005G247900 Chr05 + View
Gossypium raimondii Gorai.013G032900 Chr13 - View
Gossypium raimondii Gorai.007G197900 Chr07 - View
Lupinus albus Lalb_Chr09g0321981 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Lalb_Chr09 - View
Lupinus albus Lalb_Chr03g0025381 PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 Lalb_Chr03 - View
Lotus japonicus Lj3g0006035 PTHR10071//PTHR10071:SF183 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 7 chr3 - View
Lotus japonicus Lj1g0007066 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED chr1 + View
Lotus japonicus Lj2g0003413 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED chr2 + View
Lonicera japonica Lj2P461T26 GWHAAZE00000002 + View
Malus domestica MD15G1249700 GATA transcription factor 5 Chr15 - View
Manihot esculenta Manes.04G084400 Chromosome04 - View
Medicago truncatula Medtr5g021340 GATA type zinc finger transcription factor family protein chr5 + View
Medicago truncatula Medtr3g117380 GATA type zinc finger transcription factor family protein chr3 + View
Nelumbo nucifera Nn6g32221 chr6 + View
Olea europaea Oeu004824.1 chr3 + View
Olea europaea Oeu046137.1 chr16 - View
Petunia axillaris Peaxi162Scf00016g00151 GATA transcription factor 5 Peaxi162Scf00016 - View
Punica granatum PGR042G2238 NC_045130.1 - View
Prunus persica Prupe.8G086100 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Pp08 - View
Prunus persica Prupe.7G164500 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Pp07 + View
Pisum sativum Psat7g182280 GATA zinc finger chr7LG7 + View
Pisum sativum Psat5g004680 GATA zinc finger chr5LG3 - View
Papaver somniferum PSO210G2859 NC_039359.1 + View
Papaver somniferum PSO675G1458 NC_039358.1 + View
Papaver somniferum PSO541G2282 NC_039363.1 + View
Papaver somniferum PSO170G2505 NC_039360.1 - View
Populus trichocarpa Potri.009G123400 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED Chr09 + View
Populus trichocarpa Potri.005G117600 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED Chr05 - View
Populus trichocarpa Potri.004G161500 PTHR10071//PTHR10071:SF163 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // GATA TRANSCRIPTION FACTOR 14-RELATED Chr04 + View
Phaseolus vulgaris Phvul.002G112000 PTHR10071:SF213 - GATA TRANSCRIPTION FACTOR 3 Chr02 - View
Phaseolus vulgaris Phvul.011G039600 PTHR10071:SF183 - GATA TRANSCRIPTION FACTOR 7 Chr11 - View
Phaseolus vulgaris Phvul.009G003800 PTHR10071:SF163 - GATA TRANSCRIPTION FACTOR 14-RELATED Chr09 - View
Rhododendron simsii Rhsim11G0182700 chr11 + View
Salvia bowleyana SalBow6G7130 GWHASIU00000002 - View
Salix brachista Sabra05G0096600 GWHAAZH00000005 - View
Salix brachista Sabra04G0108400 GWHAAZH00000004 + View
Simmondsia chinensis Sc08g0000810 GWHAASQ00000008 + View
Sechium edule Sed0017617 LG01 - View
Sechium edule Sed0022432 LG05 + View
Solanum lycopersicum Solyc01g110310.3 GATA transcription factor (AHRD V3.3 *** K4B3P4_SOLLC) SL4.0ch01 + View
Solanum lycopersicum Solyc03g033660.4 GATA transcription factor (AHRD V3.3 *** K4BFN8_SOLLC) SL4.0ch03 - View
Schrenkiella parvula Sp7g32470 PTHR10071:SF213 - GATA TRANSCRIPTION FACTOR 3 ch7-5 + View
Solanum pennellii Sopen01g052460 Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. | GATA transcription factor 5 (GATA5) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type , Transcription factor, GATA, plant , Zinc finger, GATA-type | BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 Spenn-ch01 + View
Solanum pennellii Sopen02g013380 Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. | GATA transcription factor 5 (GATA5) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type , Transcription factor, GATA, plant , Zinc finger, GATA-type | BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 Spenn-ch02 - View
Solanum pennellii Sopen03g006450 Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. | GATA transcription factor 5 (GATA5) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type , Transcription factor, GATA, plant , Zinc finger, GATA-type | BEST Arabidopsis thaliana protein match is: GATA transcription factor 6 Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400012014 GATA domain class transcription factor ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400003545 GATA transcription factor 5 ST4.03ch02 - View
Solanum tuberosum PGSC0003DMG400003126 AG-motif binding protein-4 ST4.03ch01 + View
Solanum tuberosum PGSC0003DMG400038589 Zinc finger family protein ST4.03ch03 - View
Selenicereus undatus Hund00221 Scaffold_33678 - View
Selenicereus undatus Hund06277 Scaffold_33676 + View
Selenicereus undatus Hund16469 Scaffold_33677 + View
Trochodendron aralioides TAR381G0055 group11 - View
Trochodendron aralioides TAR625G0416 group4 - View
Trochodendron aralioides TAR628G1636 group5 + View
Theobroma cacao Thecc.01G024200 GATA transcription factor 5 Chromosome_1 - View
Theobroma cacao Thecc.02G076600 GATA transcription factor 5 Chromosome_2 - View
Tarenaya hassleriana THA.LOC104804549 GATA transcription factor 7 NW_010971389.1 + View
Tarenaya hassleriana THA.LOC104807292 GATA transcription factor 3 NW_010963495.1 - View
Trifolium pratense TPR.G16243 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI73G1295 NC_052232.1 + View
Tripterygium wilfordii TWI79G0799 NC_052238.1 - View
Tripterygium wilfordii TWI31G0074 NC_052233.1 - View
Tripterygium wilfordii TWI75G1702 NC_052253.1 - View
Utricularia gibba unitig_744.g24263 unitig_744 + View
Vaccinium macrocarpon vmacro02059 Similar to GATA5: GATA transcription factor 5 (Arabidopsis thaliana OX%3D3702) chr1_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1309G2792 CM024072.1 + View
Vigna mungo VMungo1215G1458 CM024074.1 + View
Vigna mungo VMungo1127G1306 CM024076.1 - View
Vitis vinifera GSVIVG01024194001 chr3 + View
Vitis vinifera GSVIVG01018833001 chr4 + View