Gene: Sopen02g013380

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen02g013380
  • Transcript Identifier Sopen02g013380.1
  • Gene Type Coding gene
  • Location Spenn-ch02 : 36694144-36695027 : negative

Gene Family Information

  • ID HOM05D000299
  • #Genes/#Species 1506/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen02g013380.1

Descriptions

  • Description Encodes GATA transcription factor gene GNC, involved in regulating carbon and nitrogen metabolism. Expression occurs in aerial tissue at an early stage of development and is inducible by nitrate. | GATA transcription factor 5 (GATA5) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, NHR/GATA-type , Transcription factor, GATA, plant , Zinc finger, GATA-type | BEST Arabidopsis thaliana protein match is: GATA transcription factor 6
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0045893
IEA
InterPropositive regulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000679 Zinc finger, GATA-type
IPR016679 Transcription factor, GATA, plant
IPR013088 Zinc finger, NHR/GATA-type
Mapman id Description
15.5.1.3.1 RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA)