Gene: Cc02_g17010
General Information
Structural Information
- Species Coffea canephora
- Gene Identifier Cc02_g17010
- Transcript Identifier Cc02_g17010.1
- Gene Type Coding gene
- Location chr2 : 15626112-15627332 : negative
Gene Family Information
- ID HOM05D000299
- #Genes/#Species 1506/100
- Phylogenetic origin
- ID ORTHO05D000079
- #Genes/#Species 2384/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- UniProtKB Q9FH57
- UniProtKB Q9SD38
- UniProtKB D9ZIZ0
- UniProtKB B9HRG7
- UniProtKB O65515
- UniProtKB Q76DY0
- id GSCOCG00014204001
Descriptions
- Description Putative GATA transcription factor 5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045893 | IEA | InterPro | positive regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT4G34680 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0008270 | IEA | InterPro | zinc ion binding | |
| GO:0043565 | IEA | InterPro | sequence-specific DNA binding | |
| GO:0000976 | ISO | PLAZA Integrative Orthology | transcription cis-regulatory region binding | AT5G66320 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT4G34680 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.1.3.1 | RNA biosynthesis.transcriptional regulation.C2C2 transcription factor superfamily.GATA trancription factor families.transcription factor (A/B-GATA) |