Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold1G00386 scaffold1 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G29040 LG-1 + View
Acer truncatum Atru.chr5.1216 chr5 - View
Arabidopsis lyrata AL4G47290 scaffold_4 + View
Avicennia marina MSTRG.18175 ScioBoG_22153_HRSCAF_22259 - View
Amaranthus hybridus Ah.08g213240 AmaHy_arrow1_Scaffold_8 - View
Amaranthus hybridus Ah.06g189680 Autophagy-related protein 18a (AtATG18a) (Protein PEROXISOME UNUSUAL POSITIONING 2) AmaHy_arrow1_Scaffold_6 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.MSM61Y PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.09 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.8JFH4G PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 arahy.Tifrunner.gnm1.Arahy.19 - View
Arabidopsis thaliana AT2G47720 hypothetical protein FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 7 plant structures%3B EXPRESSED DURING: 4 anthesis%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%2C D bilateral stage%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT3G62770.1)%3B Has 21 Blast hits to 21 proteins in 5 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 0%3B Fungi - 0%3B Plants - 21%3B Viruses - 0%3B Other Eukaryotes - 0 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G62770 Transducin/WD40 repeat-like superfamily protein Required for autophagosome formation during nutrient deprivation and senescence. AtATG18a%3B FUNCTIONS IN: molecular_function unknown%3B INVOLVED IN: autophagy%2C leaf senescence%2C response to starvation%3B LOCATED IN: chloroplast%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: homolog of yeast autophagy 18 (ATG18) D (TAIR:AT3G56440.1)%3B Has 1516 Blast hits to 1443 proteins in 266 species: Archae - 0%3B Bacteria - 93%3B Metazoa - 578%3B Fungi - 450%3B Plants - 210%3B Viruses - 2%3B Other Eukaryotes - 183 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaC02g10311 ChrC02 - View
Brassica carinata BcaB02g08099 ChrB02 + View
Brassica napus A04p00530 A04 + View
Camellia sinensis var. sinensis CSS0017985 PREDICTED: autophagy-related protein 18a isoform X1 [Nelumbo nucifera] Chr6 + View
Camellia sinensis var. sinensis CSS0024395 hypothetical protein JCGZ_13893 [Jatropha curcas] Chr13 + View
Camellia sinensis var. sinensis CSS0018737 PREDICTED: autophagy-related protein 18a [Vitis vinifera] Chr11 - View
Cannabis sativa CANSAT25G1461 NC_044370.1 + View
Cicer arietinum L. Ca_10123_v3 Ca_LG4_v3 + View
Cicer arietinum L. Ca_09140_v3 Ca_LG3_v3 + View
Coffea canephora Cc01_g20570 Putative WD repeat domain phosphoinositide-interacting protein 3 chr1 + View
Citrus clementina Ciclev10001616m.g scaffold_5 + View
Citrus clementina Ciclev10023707m.g scaffold_3 + View
Carpinus fangiana Cfa005974 Cfa02 - View
Carya illinoinensis CiPaw.07G104200 PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Chr07 + View
Citrullus lanatus ClCG09G006140 WD repeat domain phosphoinositide-interacting protein CG_Chr09 - View
Cucumis melo MELO3C016035.2 WD-repeat protein, putative chr01 - View
Carica papaya Cpa.g.sc9.199 supercontig_9 + View
Chenopodium quinoa AUR62000784 ATG18A: Autophagy-related protein 18a C_Quinoa_Scaffold_2088 - View
Chenopodium quinoa AUR62033181 ATG18A: Autophagy-related protein 18a C_Quinoa_Scaffold_2244 - View
Chenopodium quinoa AUR62008597 ATG18A: Autophagy-related protein 18a C_Quinoa_Scaffold_1710 + View
Capsella rubella Carub.0004s3044 KOG2111 - Uncharacterized conserved protein, contains WD40 repeats scaffold_4 + View
Cucumis sativus L. CsaV3_7G029030 WD-repeat protein, putative chr7 + View
Davidia involucrata Dinv33027 GWHABJS00000010 + View
Durio zibethinus Duzib138G1232 NW_019167893.1 - View
Durio zibethinus Duzib211G0412 NW_019168049.1 - View
Durio zibethinus Duzib177G0303 NW_019168004.1 - View
Erigeron canadensis ECA236G3080 Conyza_canadensis_scaffold:3 + View
Erigeron canadensis ECA247G3400 Conyza_canadensis_scaffold:7 + View
Eucalyptus grandis Eucgr.K03455 Chr11 + View
Erythranthe guttata Migut.D00188 scaffold_4 + View
Eutrema salsugineum Thhalv10005977m.g PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 scaffold_19 + View
Fragaria x ananassa FAN27G3053 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Fvb2-1 + View
Fragaria x ananassa FAN20G1526 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Fvb2-3 - View
Fragaria x ananassa FAN24G1025 PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Fvb2-2 - View
Fragaria vesca FvH4_2g25170 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Fvb2 + View
Gossypium hirsutum Gohir.A11G115800 PF00400 - WD domain, G-beta repeat (WD40) A11 - View
Gossypium hirsutum Gohir.D12G010100 PF00400 - WD domain, G-beta repeat (WD40) D12 + View
Gossypium hirsutum Gohir.D11G120700 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 D11 - View
Gossypium hirsutum Gohir.A08G117400 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 A08 + View
Gossypium hirsutum Gohir.A12G010000 PF00400 - WD domain, G-beta repeat (WD40) A12 + View
Glycine max Glyma.10G152500 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Gm10 - View
Glycine max Glyma.19G209200 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Gm19 + View
Glycine max Glyma.03G212100 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Gm03 + View
Gossypium raimondii Gorai.008G010100 Chr08 + View
Gossypium raimondii Gorai.007G129500 Chr07 - View
Helianthus annuus HanXRQChr06g0163921 Probable transducin/WD40 repeat-like superfamily protein HanXRQChr06 - View
Hydrangea macrophylla Hma1.2p1_0491F.1_g164380 Hma1.2p1_0491F.1 + View
Lupinus albus Lalb_Chr18g0047201 PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Lalb_Chr18 - View
Lotus japonicus Lj5g0023439 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 chr5 + View
Lotus japonicus Lj5g0007910 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 chr5 - View
Lotus japonicus Lj1g0005683 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 chr1 + View
Lonicera japonica Lj1A33G86 GWHAAZE00000001 - View
Lonicera japonica Lj2A1189T45 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_8_54600 PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Lsat_1_v8_lg_8 - View
Malus domestica MD12G1215700 Transducin/WD40 repeat-like superfamily protein Chr12 - View
Malus domestica MD11G1303400 Transducin/WD40 repeat-like superfamily protein Chr11 + View
Malus domestica MD03G1283100 Transducin/WD40 repeat-like superfamily protein Chr03 - View
Manihot esculenta Manes.09G169300 Chromosome09 + View
Manihot esculenta Manes.01G216100 Chromosome01 + View
Manihot esculenta Manes.05G064900 Chromosome05 - View
Medicago truncatula Medtr1g083230 WD repeat phosphoinositide-interacting-like protein chr1 + View
Medicago truncatula Medtr7g108520 WD repeat phosphoinositide-interacting-like protein chr7 + View
Olea europaea Oeu009092.1 chr1 - View
Olea europaea Oeu047458.1 chr20 + View
Olea europaea Oeu024511.1 chr11 - View
Petunia axillaris Peaxi162Scf00071g00635 WD repeat domain phosphoinositide-interacting protein 3 Peaxi162Scf00071 - View
Punica granatum PGR044G1515 NC_045134.1 + View
Prunus persica Prupe.8G256500 PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Pp08 + View
Pisum sativum Psat6g166880 WD domain + G-beta repeat chr6LG2 - View
Populus trichocarpa Potri.002G207865 Chr02 - View
Populus trichocarpa Potri.005G026600 PTHR11227//PTHR11227:SF18 - WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED // WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Chr05 - View
Populus trichocarpa Potri.014G132300 Chr14 - View
Phaseolus vulgaris Phvul.001G205000 PTHR11227:SF18 - WD REPEAT DOMAIN PHOSPHOINOSITIDE-INTERACTING PROTEIN 3 Chr01 + View
Quercus lobata QL12p026741 12 + View
Rhododendron simsii Rhsim13G0014300 chr13 - View
Salvia bowleyana SalBow3G0309 GWHASIU00000006 + View
Salix brachista Sabra14G0098600 GWHAAZH00000014 - View
Salix brachista Sabra02G0151400 GWHAAZH00000002 + View
Sechium edule Sed0020319 LG09 + View
Sechium edule Sed0015289 LG07 - View
Trochodendron aralioides TAR362G1014 group17 - View
Trochodendron aralioides TAR365G0325 group16 + View
Theobroma cacao Thecc.01G295200 Transducin/WD40 repeat-like superfamily protein Chromosome_1 + View
Trifolium pratense TPR.G9625 Tp57577_TGAC_v2_LG6 - View
Trifolium pratense TPR.G33973 Tp57577_TGAC_v2_LG1 - View
Tripterygium wilfordii TWI23G0300 NC_052239.1 - View
Tripterygium wilfordii TWI14G0484 NC_052249.1 - View
Utricularia gibba unitig_0.g654 unitig_0 + View
Vaccinium macrocarpon vmacro02477 Similar to ATG18A: Autophagy-related protein 18a (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo1383G2460 CM024070.1 + View
Vigna mungo VMungo0720G1860 CM024071.1 - View
Vitis vinifera GSVIVG01010945001 chr7 + View