Gene: vmacro02477

General Information

Structural Information

  • Species Vaccinium macrocarpon
  • Gene Identifier vmacro02477
  • Transcript Identifier vmacro02477-RA
  • Gene Type Coding gene
  • Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 1427535-1432112 : negative

Gene Family Information

  • ID HOM05D001050
  • #Genes/#Species 579/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id vmacro02477_Vaccinium_macrocarpon_Stevens_v1

Descriptions

  • Description Similar to ATG18A: Autophagy-related protein 18a (Arabidopsis thaliana OX=3702)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT3G62770
GO:0010508
ISO
PLAZA Integrative Orthologypositive regulation of autophagy AT3G62770
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT3G62770
GO:0006914
ISO
PLAZA Integrative Orthologyautophagy AT3G62770
GO:0010150
ISO
PLAZA Integrative Orthologyleaf senescence AT3G62770
GO:0042594
ISO
PLAZA Integrative Orthologyresponse to starvation AT3G62770
GO:0006970
ISO
PLAZA Integrative Orthologyresponse to osmotic stress AT3G62770
GO:0050832
ISO
PLAZA Integrative Orthologydefense response to fungus AT3G62770
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G62770

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G62770
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G62770

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
19.3.3.5.1.3 Protein homeostasis.autophagy.phagophore expansion.membrane shuttling.ATG9-2-18 membrane-recruiting complex.component ATG18