Acer truncatum |
Atru.chr1.520 |
|
chr1 |
- |
View |
Actinidia chinensis |
Actinidia31804 |
|
Lachesis_group21 |
+ |
View |
Actinidia chinensis |
Actinidia32897 |
|
Lachesis_group22 |
- |
View |
Actinidia chinensis |
Actinidia34079 |
|
Lachesis_group3 |
+ |
View |
Arabidopsis lyrata |
AL7G27590 |
|
scaffold_7 |
- |
View |
Arabidopsis lyrata |
AL8G26390 |
|
scaffold_8 |
+ |
View |
Avicennia marina |
MSTRG.17233 |
|
ScioBoG_19743_HRSCAF_19834 |
+ |
View |
Avicennia marina |
MSTRG.8767 |
|
ScioBoG_11560_HRSCAF_11609 |
- |
View |
Amaranthus hybridus |
Ah.07g208930 |
|
AmaHy_arrow1_Scaffold_7 |
+ |
View |
Aquilegia oxysepala |
Aqoxy7G00447 |
|
CHR07 |
- |
View |
Arachis hypogaea |
arahy.Tifrunner.gnm1.ann1.3M2LT7 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
arahy.Tifrunner.gnm1.Arahy.19 |
+ |
View |
Arabidopsis thaliana |
AT4G25500 |
arginine/serine-rich splicing factor 35 encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers%2C roots%2C stems%2C and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010%2C 22:2926. arginine/serine-rich splicing factor 35 (RSP35)%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: nuclear mRNA splicing%2C via spliceosome%2C RNA splicing%3B LOCATED IN: nuclear speck%2C spliceosomal complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT5G52040.2)%3B Has 15818 Blast hits to 12132 proteins in 578 species: Archae - 10%3B Bacteria - 734%3B Metazoa - 9656%3B Fungi - 1783%3B Plants - 2169%3B Viruses - 46%3B Other Eukaryotes - 1420 (source: NCBI BLink). |
Chr4 |
+ |
View |
Arabidopsis thaliana |
AT5G52040 |
RNA-binding (RRM/RBD/RNP motifs) family protein encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers%2C roots%2C stems%2C and leaves) examined. Barta et al (2010) have proposed a nomenclature for Serine/Arginine-Rich Protein Splicing Factors (SR proteins): Plant Cell. 2010%2C 22:2926. ATRSP41%3B FUNCTIONS IN: RNA binding%2C nucleotide binding%2C nucleic acid binding%3B INVOLVED IN: nuclear mRNA splicing%2C via spliceosome%2C RNA splicing%3B LOCATED IN: spliceosomal complex%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: RNA recognition motif%2C RNP-1 (InterPro:IPR000504)%2C Nucleotide-binding%2C alpha-beta plait (InterPro:IPR012677)%3B BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 (TAIR:AT4G25500.4)%3B Has 506050 Blast hits to 500572 proteins in 22103 species: Archae - 10893%3B Bacteria - 305035%3B Metazoa - 98290%3B Fungi - 14007%3B Plants - 29495%3B Viruses - 35939%3B Other Eukaryotes - 12391 (source: NCBI BLink). |
Chr5 |
+ |
View |
Amborella trichopoda |
ATR0757G025 |
|
AmTr_v1.0_scaffold00069 |
- |
View |
Brassica carinata |
BcaC09g50766 |
|
ChrC09 |
- |
View |
Brassica carinata |
BcaC01g06153 |
|
ChrC01 |
+ |
View |
Brassica napus |
C03p18710 |
|
C03 |
- |
View |
Brassica napus |
A03p15910 |
|
A03 |
- |
View |
Brassica napus |
A08p21110 |
|
A08 |
- |
View |
Brassica oleracea |
BolC3t14262H |
|
C3 |
- |
View |
Brassica rapa |
BraA03t10881Z |
|
A03 |
- |
View |
Brassica rapa |
BraA03t14674Z |
|
A03 |
+ |
View |
Brassica rapa |
BraA08t34061Z |
|
A08 |
- |
View |
Beta vulgaris |
EL10Ac3g05690 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Chr3_EL10_PGA_scaffold7 |
+ |
View |
Camellia sinensis var. sinensis |
CSS0047554 |
arginine/serine-rich splicing factor, putative [Ricinus communis] |
Chr7 |
- |
View |
Cicer arietinum L. |
Ca_10797_v3 |
|
Ca_LG4_v3 |
- |
View |
Corylus avellana |
Haze_13757 |
Similar to RS40: Serine/arginine-rich splicing factor RS40 (Arabidopsis thaliana OX%3D3702) |
5 |
- |
View |
Coffea canephora |
Cc02_g03400 |
Arginine/serine-rich-splicing factor RSP40 |
chr2 |
- |
View |
Coffea canephora |
Cc02_g37250 |
Hypothetical protein |
chr2 |
+ |
View |
Citrus clementina |
Ciclev10005021m.g |
|
scaffold_9 |
+ |
View |
Ceratophyllum demersum |
CDE11G0219 |
|
9 |
+ |
View |
Carpinus fangiana |
Cfa008278 |
|
Cfa03 |
+ |
View |
Cardamine hirsuta |
CARHR232900 |
arginine/serine-rich splicing factor 35 |
Chr7 |
+ |
View |
Cardamine hirsuta |
CARHR264980 |
arginine/serine-rich splicing factor 35 |
Chr8 |
+ |
View |
Carya illinoinensis |
CiPaw.03G102400 |
KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) |
Chr03 |
+ |
View |
Carya illinoinensis |
CiPaw.04G067700 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Chr04 |
- |
View |
Corchorus olitorius |
COL.COLO4_14256 |
hypothetical protein |
AWUE01015403.1 |
+ |
View |
Chenopodium quinoa |
AUR62016033 |
RS40: Serine/arginine-rich splicing factor RS40 |
C_Quinoa_Scaffold_3256 |
- |
View |
Chenopodium quinoa |
AUR62021238 |
RS40: Serine/arginine-rich splicing factor RS40 |
C_Quinoa_Scaffold_1783 |
- |
View |
Capsella rubella |
Carub.0007s1549 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
scaffold_7 |
- |
View |
Capsella rubella |
Carub.0008s1213 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
scaffold_8 |
+ |
View |
Davidia involucrata |
Dinv32425 |
|
GWHABJS00000020 |
+ |
View |
Davidia involucrata |
Dinv28487 |
|
GWHABJS00000004 |
- |
View |
Davidia involucrata |
Dinv43759 |
|
GWHABJS00000016 |
+ |
View |
Durio zibethinus |
Duzib084G0415 |
|
NW_019167827.1 |
- |
View |
Durio zibethinus |
Duzib205G0174 |
|
NW_019168381.1 |
+ |
View |
Erigeron canadensis |
ECA233G3558 |
|
Conyza_canadensis_scaffold:1 |
- |
View |
Eucalyptus grandis |
Eucgr.K00223 |
|
Chr11 |
+ |
View |
Erythranthe guttata |
Migut.F00378 |
|
scaffold_6 |
- |
View |
Eutrema salsugineum |
Thhalv10014293m.g |
|
scaffold_2 |
- |
View |
Fragaria x ananassa |
FAN03G2457 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Fvb7-3 |
- |
View |
Fragaria x ananassa |
FAN01G1653 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Fvb7-4 |
- |
View |
Fragaria x ananassa |
FAN03G2658 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Fvb7-3 |
- |
View |
Fragaria x ananassa |
FAN10G4109 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Fvb7-1 |
- |
View |
Fragaria x ananassa |
FAN06G2621 |
KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) |
Fvb7-2 |
+ |
View |
Fragaria x ananassa |
FAN06G3763 |
KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) |
Fvb7-2 |
+ |
View |
Fragaria vesca |
FvH4_7g28991 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Fvb7 |
+ |
View |
Gossypium hirsutum |
Gohir.D12G261600 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
D12 |
- |
View |
Gossypium hirsutum |
Gohir.A12G260700 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
A12 |
- |
View |
Glycine max |
Glyma.20G155400 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Gm20 |
+ |
View |
Glycine max |
Glyma.10G239100 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Gm10 |
- |
View |
Glycine max |
Glyma.03G017200 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Gm03 |
- |
View |
Glycine max |
Glyma.07G078300 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Gm07 |
- |
View |
Gossypium raimondii |
Gorai.008G280300 |
|
Chr08 |
- |
View |
Hydrangea macrophylla |
Hma1.2p1_0099F.1_g048570 |
|
Hma1.2p1_0099F.1 |
- |
View |
Lupinus albus |
Lalb_Chr06g0160981 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Lalb_Chr06 |
+ |
View |
Lotus japonicus |
LjContig00238g0025597 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Contig00238 |
- |
View |
Lotus japonicus |
Lj3g0011397 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
chr3 |
- |
View |
Lonicera japonica |
Lj8A29G40 |
|
GWHAAZE00000008 |
- |
View |
Lonicera japonica |
Lj1C992T2 |
|
GWHAAZE00000001 |
+ |
View |
Lactuca sativa |
Lsat_1_v5_gn_8_7601 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Lsat_1_v8_lg_8 |
- |
View |
Magnolia biondii |
MBI04_g39650_MAGBIO |
AED:0.24 |
Chr04 |
+ |
View |
Malus domestica |
MD07G1264000 |
arginine/serine-rich splicing factor 35 |
Chr07 |
+ |
View |
Malus domestica |
MD01G1196700 |
arginine/serine-rich splicing factor 35 |
Chr01 |
+ |
View |
Manihot esculenta |
Manes.06G143500 |
|
Chromosome06 |
+ |
View |
Medicago truncatula |
Medtr1g101520 |
RNA-binding (RRM/RBD/RNP motif) family protein |
chr1 |
- |
View |
Nelumbo nucifera |
Nn6g34259 |
|
chr6 |
- |
View |
Nicotiana tabacum |
Nitab4.5_0001083g0050 |
RNA recognition motif domain, Nucleotide-binding, alpha-beta plait |
Nitab4.5_0001083 |
+ |
View |
Olea europaea |
Oeu030127.2 |
|
chr11 |
- |
View |
Petunia axillaris |
Peaxi162Scf00021g00624 |
RNA-binding (RRM/RBD/RNP motifs) family protein |
Peaxi162Scf00021 |
+ |
View |
Petunia axillaris |
Peaxi162Scf00648g00013 |
Dehydration-responsive element-binding protein 1D |
Peaxi162Scf00648 |
- |
View |
Punica granatum |
PGR142G1406 |
|
NC_045128.1 |
- |
View |
Prunus persica |
Prupe.2G290100 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Pp02 |
+ |
View |
Populus trichocarpa |
Potri.002G153600 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Chr02 |
+ |
View |
Populus trichocarpa |
Potri.012G133600 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Chr12 |
- |
View |
Populus trichocarpa |
Potri.015G135800 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Chr15 |
- |
View |
Phaseolus vulgaris |
Phvul.007G066560 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
Chr07 |
+ |
View |
Quercus lobata |
QL08p050587 |
|
8 |
- |
View |
Quercus lobata |
QL09p015981 |
|
9 |
- |
View |
Rosa chinensis |
RcHm_v2.0_Chr1g0376701 |
|
RcHm_v2.0_Chr1 |
+ |
View |
Rhododendron simsii |
Rhsim09G0196200 |
|
chr09 |
+ |
View |
Salvia bowleyana |
SalBow4G1993 |
|
GWHASIU00000008 |
- |
View |
Salix brachista |
Sabra14G0055600 |
|
GWHAAZH00000014 |
+ |
View |
Salix brachista |
Sabra12G0100400 |
|
GWHAAZH00000012 |
- |
View |
Solanum lycopersicum |
Solyc03g026240.4 |
Serine/arginine-rich-splicing factor RS40 (AHRD V3.3 *** A0A0M8KTC1_NICAT) |
SL4.0ch03 |
- |
View |
Schrenkiella parvula |
Sp7g23520 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
ch7-4 |
+ |
View |
Schrenkiella parvula |
Sp6g14290 |
K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6) |
ch6-6 |
+ |
View |
Solanum pennellii |
Sopen03g005120 |
encodes an arginine/serine-rich splicing factor. transcript is alternatively spliced and is differentially expressed in different tissues (flowers, roots, stems, and leaves) examined. | RNA-binding (RRM/RBD/RNP motifs) family protein | FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding | INVOLVED IN: nuclear mRNA splicing, via spliceosome, RNA splicing | LOCATED IN: spliceosomal complex | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait | BEST Arabidopsis thaliana protein match is: arginine/serine-rich splicing factor 35 |
Spenn-ch03 |
- |
View |
Solanum tuberosum |
PGSC0003DMG400017052 |
Splicing factor |
ST4.03ch01 |
- |
View |
Solanum tuberosum |
PGSC0003DMG400014266 |
Splicing factor |
ST4.03ch03 |
+ |
View |
Selenicereus undatus |
Hund11774 |
|
Scaffold_33679 |
- |
View |
Selenicereus undatus |
Hund04702 |
|
Scaffold_19641 |
+ |
View |
Theobroma cacao |
Thecc.03G170400 |
Arginine/serine-rich splicing factor 35 |
Chromosome_3 |
+ |
View |
Tarenaya hassleriana |
THA.LOC104825091 |
serine/arginine-rich splicing factor RS40-like isoform X1 |
NW_010966986.1 |
+ |
View |
Tarenaya hassleriana |
THA.LOC104798738 |
serine/arginine-rich splicing factor RS41 isoform X1 |
NW_010968263.1 |
+ |
View |
Trifolium pratense |
TPR.G17412 |
|
Tp57577_TGAC_v2_scaf_229 |
- |
View |
Trifolium pratense |
TPR.G17598 |
|
Tp57577_TGAC_v2_scaf_223 |
+ |
View |
Tripterygium wilfordii |
TWI14G0669 |
|
NC_052249.1 |
- |
View |
Tripterygium wilfordii |
TWI39G1065 |
|
NC_052250.1 |
- |
View |
Vaccinium macrocarpon |
vmacro09860 |
Similar to RS40: Serine/arginine-rich splicing factor RS40 (Arabidopsis thaliana OX%3D3702) |
chr8_Vaccinium_macrocarpon_Stevens_v1 |
- |
View |
Vaccinium macrocarpon |
vmacro06725 |
Similar to RS40: Serine/arginine-rich splicing factor RS40 (Arabidopsis thaliana OX%3D3702) |
chr2_Vaccinium_macrocarpon_Stevens_v1 |
+ |
View |
Vigna mungo |
VMungo0331G1344 |
|
CM024078.1 |
- |
View |
Vitis vinifera |
GSVIVG01010624001 |
|
chr16 |
+ |
View |