Gene: Potri.012G133600

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.012G133600
  • Transcript Identifier Potri.012G133600.2
  • Gene Type Coding gene
  • Location Chr12 : 14897443-14900509 : negative

Gene Family Information

  • ID HOM05D001628
  • #Genes/#Species 396/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.012G133600.v4.1
  • pacid 42783272
  • synonym POPTR_0012s13920

Descriptions

  • Description K12893 - splicing factor, arginine/serine-rich 4/5/6 (SFRS4_5_6)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0031053
ISO
PLAZA Integrative Orthologyprimary miRNA processing AT4G25500
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT3G61860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G61860
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G61860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT3G61860
GO:0005681
ISO
PLAZA Integrative Orthologyspliceosomal complex AT3G61860
GO:0010445
ISO
PLAZA Integrative Orthologynuclear dicing body AT4G25500

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.3 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RS31/40/41)