Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G4740 LG-7 - View
Acer truncatum Atru.chr13.175_Atru.chr13.176 chr13 + View
Actinidia chinensis Actinidia29779 Lachesis_group27 - View
Actinidia chinensis Actinidia37963 Lachesis_group7 - View
Aquilegia oxysepala Aqoxy6G01855 CHR06 + View
Aquilegia oxysepala Aqoxy5G01064 CHR05 + View
Arabidopsis thaliana AT1G76170 2-thiocytidine tRNA biosynthesis protein, TtcA 2-thiocytidine tRNA biosynthesis protein%2C TtcA%3B FUNCTIONS IN: ATP binding%3B INVOLVED IN: tRNA processing%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 20 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729)%2C Uncharacterised protein family UPF0021%2C C-terminal (InterPro:IPR000541)%2C PP-loop (InterPro:IPR011063)%2C 2-thiocytidine tRNA biosynthesis protein%2C TtcA (InterPro:IPR012089)%3B BEST Arabidopsis thaliana protein match is: repressor of lrx1 (TAIR:AT2G44270.1)%3B Has 4635 Blast hits to 4558 proteins in 1674 species: Archae - 313%3B Bacteria - 3429%3B Metazoa - 162%3B Fungi - 209%3B Plants - 60%3B Viruses - 0%3B Other Eukaryotes - 462 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0661G222 AmTr_v1.0_scaffold00001 - View
Brassica carinata BcaC08g47111 ChrC08 - View
Brassica carinata BcaC08g47284 ChrC08 + View
Brassica napus A07p41740 A07 - View
Brassica napus C06p50120 C06 - View
Brassica oleracea BolC6t40052H C6 - View
Brassica rapa BraA07t31703Z A07 - View
Camellia sinensis var. sinensis CSS0028449 hypothetical protein JCGZ_08138 [Jatropha curcas] Chr9 - View
Camellia sinensis var. sinensis CSS0035799 hypothetical protein POPTR_0005s08520g [Populus trichocarpa] Chr4 + View
Capsicum annuum CAN.G311.94 PGAv.1.6.scaffold311 - View
Corylus avellana Haze_22739 Similar to NCS6: Cytoplasmic tRNA 2-thiolation protein 1 (Arabidopsis thaliana OX%3D3702) 3 - View
Coffea canephora Cc10_g00890 Cytoplasmic tRNA 2-thiolation protein 1 chr10 + View
Citrus clementina Ciclev10002910m.g scaffold_5 - View
Carpinus fangiana Cfa014031 Cfa05 - View
Cardamine hirsuta CARHR069720 2-thiocytidine tRNA biosynthesis protein, TtcA Chr2 - View
Carya illinoinensis CiPaw.08G071000 Chr08 - View
Citrullus lanatus ClCG08G013910 Cytoplasmic tRNA 2-thiolation protein CG_Chr08 + View
Cucumis melo MELO3C017006.2 Cytoplasmic tRNA 2-thiolation protein 1-like protein chr07 + View
Carica papaya Cpa.g.sc26.233 supercontig_26 + View
Capsella rubella Carub.0002s2306 K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) scaffold_2 - View
Cucumis sativus L. CsaV3_4G037080 Serine/arginine repetitive matrix protein chr4 - View
Davidia involucrata Dinv39573 GWHABJS00000011 - View
Durio zibethinus Duzib093G0992 NW_019167937.1 - View
Erythranthe guttata Migut.C00918 scaffold_3 - View
Eutrema salsugineum Thhalv10018770m.g K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) scaffold_9 + View
Fragaria x ananassa FAN27G2060 KOG2840 - Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily Fvb2-1 + View
Fragaria x ananassa FAN20G1236 Fvb2-3 - View
Fragaria vesca FvH4_2g37771 K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) Fvb2 + View
Gossypium hirsutum Gohir.D05G184300 K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) D05 + View
Gossypium hirsutum Gohir.A05G181300 K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) A05 + View
Gossypium raimondii Gorai.009G189800 Chr09 + View
Lupinus albus Lalb_Chr01g0008401 Lalb_Chr01 + View
Lotus japonicus Lj1g0005069 chr1 + View
Lonicera japonica Lj4A14T52 GWHAAZE00000004 + View
Lactuca sativa Lsat_1_v5_gn_8_28281 Lsat_1_v8_lg_8 + View
Malus domestica MD15G1004300 repressor of lrx1 Chr15 + View
Malus domestica MD08G1004800 repressor of lrx1 Chr08 + View
Manihot esculenta Manes.05G140800 Chromosome05 + View
Nelumbo nucifera Nn6g31840 chr6 - View
Petunia axillaris Peaxi162Scf00174g01410 conserved hypothetical protein Peaxi162Scf00174 - View
Punica granatum PGR083G0750 NC_045133.1 - View
Prunus persica Prupe.1G356900 K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) Pp01 + View
Papaver somniferum PSO675G6932 NC_039358.1 - View
Papaver somniferum PSO541G1452 NC_039363.1 - View
Populus trichocarpa Potri.002G013601 Chr02 + View
Quercus lobata QL02p013572 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr6g0303941 RcHm_v2.0_Chr6 - View
Rhododendron simsii Rhsim06G0009600 chr06 + View
Rhododendron simsii Rhsim07G0252900 chr07 - View
Salvia bowleyana SalBow7G2120 GWHASIU00000005 + View
Salvia bowleyana SalBow6G3808 GWHASIU00000002 - View
Salix brachista Sabra02G0010600 GWHAAZH00000002 + View
Simmondsia chinensis Sc02g0008960 GWHAASQ00000002 - View
Sechium edule Sed0019383 LG01 + View
Solanum lycopersicum Solyc12g094480.3 hypothetical protein (AHRD V3.3 *** AT1G20430.1) SL4.0ch12 - View
Schrenkiella parvula Sp5g31300 ch5-7 - View
Solanum pennellii Sopen04g035780 unknown protein Spenn-ch04 - View
Solanum pennellii Sopen12g031370 unknown protein Spenn-ch12 - View
Solanum tuberosum PGSC0003DMG400009966 Conserved gene of unknown function ST4.03ch04 - View
Solanum tuberosum PGSC0003DMG400029324 Conserved gene of unknown function ST4.03ch12 - View
Selenicereus undatus Hund05132 Scaffold_19641 + View
Trochodendron aralioides TAR381G0186 group11 + View
Trochodendron aralioides TAR628G0269 group5 - View
Theobroma cacao Thecc.08G055000 Chromosome_8 - View
Tripterygium wilfordii TWI36G1301 NC_052237.1 - View
Tripterygium wilfordii TWI56G1224 NC_052242.1 - View
Vaccinium macrocarpon vmacro04390 Protein of unknown function chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro21838 Similar to NCS6: Cytoplasmic tRNA 2-thiolation protein 1 (Arabidopsis thaliana OX%3D3702) chr10_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01008705001 chr18 + View