Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold48G18039 scaffold48 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG6G13660 LG-6 - View
Acer truncatum Atru.chr13.558 chr13 - View
Actinidia chinensis Actinidia15293 Lachesis_group26 - View
Actinidia chinensis Actinidia22571 Lachesis_group28 - View
Arabidopsis lyrata AL1G31850 scaffold_1 + View
Arabidopsis lyrata AL7G14120 scaffold_7 + View
Avicennia marina MSTRG.24308 ScioBoG_4088_HRSCAF_4107 - View
Avicennia marina MSTRG.25137 ScioBoG_4119_HRSCAF_4138 + View
Avicennia marina MSTRG.1305 ScioBoG_102833_HRSCAF_103052 - View
Aquilegia oxysepala Aqoxy6G00999 CHR06 + View
Arabidopsis thaliana AT4G36860 LIM domain-containing protein LIM domain-containing protein%3B FUNCTIONS IN: zinc ion binding%3B LOCATED IN: plasma membrane%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C LIM-type (InterPro:IPR001781)%2C Ubiquitin interacting motif (InterPro:IPR003903)%2C Protein of unknown function DUF3633 (InterPro:IPR022087)%3B BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1)%3B Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7%3B Bacteria - 228%3B Metazoa - 4096%3B Fungi - 190%3B Plants - 320%3B Viruses - 67%3B Other Eukaryotes - 1096 (source: NCBI BLink). Chr4 - View
Brassica carinata BcaB03g12922 ChrB03 - View
Cicer arietinum L. Ca_13331_v3 Ca_LG4_v3 + View
Corylus avellana Haze_15147 Similar to DAR1: Protein DA1-related 1 (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_17617 Similar to DA1: Protein DA1 (Arabidopsis thaliana OX%3D3702) 7 + View
Coffea canephora Cc10_g03460 Protein DA1 chr10 - View
Citrus clementina Ciclev10001015m.g scaffold_5 + View
Ceratophyllum demersum CDE04G2059 2 - View
Ceratophyllum demersum CDE01G0657 11 + View
Cardamine hirsuta CARHR245220 DA1 Chr7 - View
Carya illinoinensis CiPaw.16G053200 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Chr16 + View
Carya illinoinensis CiPaw.15G071300 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Chr15 + View
Citrullus lanatus ClCG08G015420 LIM domain-containing family protein CG_Chr08 - View
Cucumis melo MELO3C010913.2 Protein DA1-related 1 chr03 - View
Carica papaya Cpa.g.sc64.39 supercontig_64 + View
Chenopodium quinoa AUR62003209 DAR1: Protein DA1-related 1 C_Quinoa_Scaffold_1000 - View
Capsella rubella Carub.0007s0346 PTHR24209//PTHR24209:SF13 - FAMILY NOT NAMED // PROTEIN DA1-RELATED 1-RELATED scaffold_7 + View
Daucus carota DCAR_019503 hypothetical protein DCARv2_Chr5 + View
Davidia involucrata Dinv26790 GWHABJS00000021 - View
Davidia involucrata Dinv39374 GWHABJS00000011 + View
Durio zibethinus Duzib264G0897 NW_019167960.1 + View
Durio zibethinus Duzib093G1011 NW_019167937.1 + View
Durio zibethinus Duzib116G0285 NW_019167949.1 - View
Eucalyptus grandis Eucgr.A00483 Chr06 - View
Erythranthe guttata Migut.C00676 scaffold_3 + View
Eutrema salsugineum Thhalv10024819m.g PTHR24209:SF13 - PROTEIN DA1-RELATED 1-RELATED scaffold_1 + View
Fragaria x ananassa FAN26G2575 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Fvb1-2 - View
Fragaria x ananassa FAN19G2712 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Fvb1-4 - View
Fragaria x ananassa FAN15G2542 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Fvb2-4 - View
Fragaria x ananassa FAN27G2927 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Fvb2-1 - View
Fragaria vesca FvH4_2g40390 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Fvb2 - View
Gossypium hirsutum Gohir.A05G197200 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins A05 - View
Gossypium hirsutum Gohir.D05G200300 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins D05 - View
Glycine max Glyma.17G247700 PF00412//PF02809//PF12315 - LIM domain (LIM) // Ubiquitin interaction motif (UIM) // Protein of unknown function (DUF3633) (DUF3633) Gm17 + View
Glycine max Glyma.11G062400 PTHR24209//PTHR24209:SF13 - FAMILY NOT NAMED // PROTEIN DA1-RELATED 1-RELATED Gm11 + View
Glycine max Glyma.02G059900 PTHR24209//PTHR24209:SF13 - FAMILY NOT NAMED // PROTEIN DA1-RELATED 1-RELATED Gm02 - View
Glycine max Glyma.14G077800 PF00412//PF02809//PF12315 - LIM domain (LIM) // Ubiquitin interaction motif (UIM) // Protein of unknown function (DUF3633) (DUF3633) Gm14 - View
Gossypium raimondii Gorai.009G205600 Chr09 - View
Lupinus albus Lalb_Chr14g0369011 PF00412//PF02809//PF12315 - LIM domain (LIM) // Ubiquitin interaction motif (UIM) // Protein of unknown function (DUF3633) (DUF3633) Lalb_Chr14 + View
Lotus japonicus Lj1g0011875 PF12315 - Protein of unknown function (DUF3633) (DUF3633) chr1 - View
Lotus japonicus Lj5g0018817 PF00412//PF02809//PF12315 - LIM domain (LIM) // Ubiquitin interaction motif (UIM) // Protein of unknown function (DUF3633) (DUF3633) chr5 + View
Lonicera japonica Lj4A46T104 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_1_19401 PF12315 - Protein of unknown function (DUF3633) (DUF3633) Lsat_1_v8_lg_1 - View
Malus domestica MD15G1271000 LIM domain-containing protein Chr15 - View
Malus domestica MD08G1037200 DA1 Chr08 - View
Manihot esculenta Manes.05G164200 Chromosome05 - View
Medicago truncatula Medtr1g021835 zinc ion-binding protein chr1 + View
Nicotiana tabacum Nitab4.5_0000110g0130 Zinc finger, LIM-type, Protein DA1 like, Ubiquitin interacting motif Nitab4.5_0000110 + View
Olea europaea Oeu019094.1 chr7 - View
Petunia axillaris Peaxi162Scf00057g01410 ubiquitin interaction motif-containing family protein Peaxi162Scf00057 - View
Punica granatum PGR031G1290 NC_045127.1 - View
Prunus persica Prupe.7G147100 Pp07 + View
Prunus persica Prupe.1G384500 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Pp01 - View
Papaver somniferum PSO541G4662 NC_039363.1 + View
Papaver somniferum PSO675G8985 NC_039358.1 + View
Populus trichocarpa Potri.014G039900 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Chr14 + View
Populus trichocarpa Potri.002G132700 KOG1703 - Adaptor protein Enigma and related PDZ-LIM proteins Chr02 + View
Phaseolus vulgaris Phvul.001G017100 PF00412//PF02809//PF12315 - LIM domain (LIM) // Ubiquitin interaction motif (UIM) // Protein of unknown function (DUF3633) (DUF3633) Chr01 - View
Phaseolus vulgaris Phvul.002G024900 Chr02 + View
Phaseolus vulgaris Phvul.003G250800 Chr03 + View
Quercus lobata QL06p044577 6 + View
Quercus lobata QL02p007262 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr6g0300341 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim06G0037300 chr06 - View
Rhododendron simsii Rhsim07G0234800 chr07 + View
Salvia bowleyana SalBow8G4491 GWHASIU00000004 - View
Salix brachista Sabra05G0104800 GWHAAZH00000005 - View
Simmondsia chinensis Sc15g0006740 GWHAASQ00000015 + View
Sechium edule Sed0025314 LG11 + View
Solanum lycopersicum Solyc04g079840.4 Protein DA1 (AHRD V3.3 *** A0A2G2ZS04_CAPAN) SL4.0ch04 + View
Solanum pennellii Sopen04g033410 DA1 (DA1) | CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type , Ubiquitin interacting motif , Protein of unknown function DUF3633 | BEST Arabidopsis thaliana protein match is: LIM domain-containing protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400016890 LIM domain containing protein ST4.03ch04 + View
Trochodendron aralioides TAR376G0734 group14 + View
Theobroma cacao Thecc.08G021000 LIM and UIM domain-containing Chromosome_8 + View
Tripterygium wilfordii TWI56G1187 NC_052242.1 + View
Vigna mungo VMungo1215G2471 CM024074.1 + View
Vitis vinifera GSVIVG01009636001 chr18 + View
Vitis vinifera GSVIVG01019042001 chr4 + View