Gene: PGSC0003DMG400016890

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400016890
  • Transcript Identifier PGSC0003DMT400043505
  • Gene Type Coding gene
  • Location ST4.03ch04 : 69164084-69171029 : positive

Gene Family Information

  • ID HOM05D000909
  • #Genes/#Species 658/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37476161
  • id PGSC0003DMG400016890.v4.03
  • uniprot M1BER7

Descriptions

  • Description LIM domain containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008285
ISO
PLAZA Integrative Orthologynegative regulation of cell population proliferation AT1G19270
GO:0048317
ISO
PLAZA Integrative Orthologyseed morphogenesis AT1G19270
GO:0080113
ISO
PLAZA Integrative Orthologyregulation of seed growth AT1G19270
GO:1900057
ISO
PLAZA Integrative Orthologypositive regulation of leaf senescence AT1G19270
GO:0046620
ISO
PLAZA Integrative Orthologyregulation of organ growth AT1G19270
GO:0046621
ISO
PLAZA Integrative Orthologynegative regulation of organ growth AT1G19270
GO:0006952
ISO
PLAZA Integrative Orthologydefense response AT5G17890
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G17890
GO:0048482
ISO
PLAZA Integrative Orthologyplant ovule morphogenesis AT1G19270
GO:0006508
ISO
PLAZA Integrative Orthologyproteolysis AT1G19270
GO:0032875
ISO
PLAZA Integrative Orthologyregulation of DNA endoreduplication AT1G19270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0043130
IBA
GOA Databaseubiquitin binding
GO:0008233
ISO
PLAZA Integrative Orthologypeptidase activity AT1G19270
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G19270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G36860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001781 Zinc finger, LIM-type
IPR003903 Ubiquitin interacting motif
IPR022087 Protein DA1-like
Mapman id Description
19.2.2.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin receptor regulatory protein (DA1)