Gene: AT4G36860

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G36860
  • Transcript Identifier AT4G36860.1
  • Gene Type Coding gene
  • Location Chr4 : 17358580-17361189 : negative

Gene Family Information

  • ID HOM05D000909
  • #Genes/#Species 658/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G36860.1
  • uniprot Q8W4F0

Descriptions

  • Description LIM domain-containing protein
  • Computational description LIM domain-containing protein; FUNCTIONS IN: zinc ion binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, LIM-type (InterPro:IPR001781), Ubiquitin interacting motif (InterPro:IPR003903), Protein of unknown function DUF3633 (InterPro:IPR022087); BEST Arabidopsis thaliana protein match is: DA1 (TAIR:AT1G19270.1); Has 6004 Blast hits to 4271 proteins in 323 species: Archae - 7; Bacteria - 228; Metazoa - 4096; Fungi - 190; Plants - 320; Viruses - 67; Other Eukaryotes - 1096 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032875
IMP, IGI
Gene Ontologyregulation of DNA endoreduplication1
GO:0006508
IEA
GOA Databaseproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IDA
ISS, IBA
Gene Ontologyubiquitin binding1 2
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0008233
IDA
Gene Ontologypeptidase activity3
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0005886
IDA
GOA Databaseplasma membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003903 Ubiquitin interacting motif
IPR001781 Zinc finger, LIM-type
IPR022087 Protein DA1-like
Mapman id Description
19.2.2.1.6 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin receptor regulatory protein (DA1)