Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG1G13120 LG-1 + View
Actinidia chinensis Actinidia24216 Lachesis_group24 + View
Actinidia chinensis Actinidia07249 Lachesis_group13 + View
Actinidia chinensis Actinidia35465 Lachesis_group2 + View
Avicennia marina MSTRG.17707 ScioBoG_19834_HRSCAF_19925 - View
Avicennia marina MSTRG.21043 ScioBoG_26769_HRSCAF_26899 - View
Arabidopsis thaliana AT2G27530 Ribosomal protein L1p/L10e family Encodes ribosomal protein L10aP. Identified in a screen for enhancers of as1. as1/pgy double mutants show defects in leaf vascular patterning and adaxial cell fate. Double mutant analysis indicates pgy genes function in the same pathway as REV%2C KAN1 and KAN2. PIGGYBACK1 (PGY1)%3B FUNCTIONS IN: structural constituent of ribosome%2C RNA binding%3B INVOLVED IN: adaxial/abaxial pattern formation%2C post-embryonic organ development%2C translation%3B LOCATED IN: cytosolic ribosome%2C cytosolic large ribosomal subunit%2C large ribosomal subunit%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143)%2C Ribosomal protein L1%2C 2-layer alpha/beta-sandwich (InterPro:IPR016094)%3B BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT1G08360.1)%3B Has 3883 Blast hits to 3882 proteins in 1276 species: Archae - 280%3B Bacteria - 1809%3B Metazoa - 457%3B Fungi - 188%3B Plants - 511%3B Viruses - 0%3B Other Eukaryotes - 638 (source: NCBI BLink). Chr2 - View
Brassica carinata BcaB02g10094 ChrB02 - View
Brassica carinata BcaB06g28148 ChrB06 - View
Brassica carinata BcaB08g36431 ChrB08 + View
Brassica carinata BcaC02g10887 ChrC02 - View
Brassica napus A07p18270 A07 - View
Brassica napus C04p24070 C04 + View
Brassica napus A10p18390 A10 + View
Brassica napus C09p54150 C09 + View
Brassica oleracea BolC9t58286H C9 + View
Brassica oleracea BolC4t23902H C4 + View
Brassica rapa BraA07t29543Z A07 - View
Beta vulgaris EL10Ac7g15821 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Chr7_EL10_PGA_scaffold5 + View
Camellia sinensis var. sinensis CSS0048475 PREDICTED: 60S ribosomal protein L10a-2 [Phoenix dactylifera] Chr11 - View
Cicer arietinum L. Ca_01660_v3 Ca_LG1_v3 - View
Corylus avellana Haze_23375 Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. indica OX%3D39946) 6 - View
Citrus clementina Ciclev10030134m.g scaffold_8 - View
Cardamine hirsuta CARHR120180 Ribosomal protein Chr4 - View
Carya illinoinensis CiPaw.14G100100 PTHR23105//PTHR23105:SF48 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // 60S RIBOSOMAL PROTEIN L10A-1-RELATED Chr14 - View
Carya illinoinensis CiPaw.13G135900 PTHR23105//PTHR23105:SF55 - RIBOSOMAL PROTEIN L7AE FAMILY MEMBER // SUBFAMILY NOT NAMED Chr13 - View
Citrullus lanatus ClCG01G012240 Ribosomal protein CG_Chr01 - View
Cucumis melo MELO3C004713.2 Ribosomal protein chr12 + View
Corchorus olitorius COL.COLO4_19878 Ribosomal protein L1 AWUE01016891.1 - View
Chenopodium quinoa AUR62009759 RPL10A: 60S ribosomal protein L10a C_Quinoa_Scaffold_2493 - View
Capsella rubella Carub.0006s2018 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED scaffold_6 - View
Capsella rubella Carub.0004s0819 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) scaffold_4 - View
Daucus carota DCAR_013384 hypothetical protein DCARv2_Chr4 - View
Daucus carota DCAR_012193 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv29486 GWHABJS00000007 - View
Durio zibethinus Duzib170G0906 NW_019167871.1 - View
Durio zibethinus Duzib168G0277 NW_019168159.1 + View
Eucalyptus grandis Eucgr.B03850 Chr02 - View
Eucalyptus grandis Eucgr.J00492 Chr10 + View
Erythranthe guttata Migut.D02448 scaffold_4 - View
Eutrema salsugineum Thhalv10017225m.g K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) scaffold_10 + View
Fragaria x ananassa FAN25G1472 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Fvb3-1 + View
Fragaria x ananassa FAN21G3513 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3-2 + View
Fragaria x ananassa FAN16G1083 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3-3 + View
Fragaria x ananassa FAN11G3377 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3-4 - View
Fragaria vesca FvH4_3g24900 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Fvb3 + View
Gossypium hirsutum Gohir.A09G095600 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) A09 + View
Gossypium hirsutum Gohir.D09G095300 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) D09 + View
Gossypium hirsutum Gohir.D05G083900 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) D05 - View
Gossypium hirsutum Gohir.A05G080800 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) A05 - View
Glycine max Glyma.13G316400 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Gm13 - View
Glycine max Glyma.12G184900 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Gm12 + View
Gossypium raimondii Gorai.006G112000 Chr06 + View
Gossypium raimondii Gorai.009G085600 Chr09 - View
Helianthus annuus HanXRQChr01g0024071 Putative ribosomal protein L1, 2-layer alpha/beta-sandwich; Ribosomal protein L1, conserved site; Ribosomal protein L1-like; Ribosomal protein L1/ribosomal biogenesis protein HanXRQChr01 - View
Hydrangea macrophylla Hma1.2p1_0578F.1_g182510 Hma1.2p1_0578F.1 + View
Lotus japonicus Lj3g0025857 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) chr3 - View
Lonicera japonica Lj2A944G11 GWHAAZE00000002 + View
Lonicera japonica Lj1C237T1 GWHAAZE00000001 - View
Lonicera japonica Lj2A963G27 GWHAAZE00000002 + View
Lactuca sativa Lsat_1_v5_gn_1_59281 PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Lsat_1_v8_lg_1 - View
Malus domestica MD03G1143900 Ribosomal protein L1p/L10e family Chr03 + View
Manihot esculenta Manes.04G003500 Chromosome04 - View
Manihot esculenta Manes.11G161800 Chromosome11 + View
Medicago truncatula Medtr2g086500 ribosomal protein L1p/L10e family protein chr2 + View
Nicotiana tabacum Nitab4.5_0000755g0150 Ribosomal protein L1/ribosomal biogenesis protein, Ribosomal protein L1, 3-layer alpha/beta-sandwich, Ribosomal protein L1, 2-layer alpha/beta-sandwich, Ribosomal protein L1, Ribosomal protein L1-like Nitab4.5_0000755 - View
Olea europaea Oeu035552.1 chr11 + View
Olea europaea Oeu051609.1 chr1 - View
Oryza sativa ssp. japonica Os01g0860300 Similar to Ribosomal protein L1. chr01 + View
Petunia axillaris Peaxi162Scf00091g00615 60S ribosomal protein L10a-1 Peaxi162Scf00091 + View
Punica granatum PGR119G2280 NC_045132.1 - View
Prunus persica Prupe.6G129700 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Pp06 + View
Pisum sativum Psat5g257440 Ribosomal protein L1p/L10e family chr5LG3 + View
Populus trichocarpa Potri.004G202766 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Chr04 - View
Phaseolus vulgaris Phvul.005G123700 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) Chr05 - View
Quercus lobata QL01p012272 1 - View
Rhododendron simsii Rhsim01G0205000 chr01 - View
Rhododendron simsii Rhsim13G0111500 chr13 + View
Salvia bowleyana SalBow6G3327 GWHASIU00000002 - View
Salix brachista Sabra04G0137000 GWHAAZH00000004 - View
Simmondsia chinensis Sc12g0004510 GWHAASQ00000012 + View
Solanum lycopersicum Solyc11g068420.2 Ribosomal protein (AHRD V3.3 *** Q6ER67_ORYSJ) SL4.0ch11 + View
Solanum lycopersicum Solyc06g074300.4 Ribosomal protein (AHRD V3.3 *** V4KXL5_EUTSA) SL4.0ch06 - View
Schrenkiella parvula Sp4g10330 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) ch4-6 - View
Schrenkiella parvula Sp1g07000 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) ch1-1 + View
Schrenkiella parvula Sp6g22810 K02865 - large subunit ribosomal protein L10Ae (RP-L10Ae, RPL10A) ch6-6 + View
Solanum pennellii Sopen11g027130 Ribosomal protein L1p/L10e family | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, RNA processing | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 , Ribosomal protein L1, 2-layer alpha/beta-sandwich | BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family Spenn-ch11 + View
Solanum pennellii Sopen06g030750 Ribosomal protein L1p/L10e family | FUNCTIONS IN: structural constituent of ribosome, RNA binding | INVOLVED IN: translation, RNA processing | LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 , Ribosomal protein L1, 2-layer alpha/beta-sandwich | BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400026361 Ribosomal protein ST4.03ch11 + View
Solanum tuberosum PGSC0003DMG401005881 Ribosomal protein L10a ST4.03ch06 - View
Selenicereus undatus Hund18756 Scaffold_33675 + View
Selenicereus undatus Hund20902 Scaffold_33673 + View
Trochodendron aralioides TAR623G1663 group7 + View
Trochodendron aralioides TAR636G2278 group1 + View
Trochodendron aralioides TAR633G1113 group2 - View
Theobroma cacao Thecc.09G283800 Ribosomal protein Chromosome_9 - View
Tarenaya hassleriana THA.LOC104826424 60S ribosomal protein L10a-2 NW_010967707.1 + View
Tarenaya hassleriana THA.LOC104800530 60S ribosomal protein L10a-2-like NW_010969548.1 - View
Tripterygium wilfordii TWI75G1582 NC_052253.1 + View
Tripterygium wilfordii TWI79G1543 NC_052238.1 + View
Tripterygium wilfordii TWI31G1268 NC_052233.1 - View
Utricularia gibba unitig_747.g21943 unitig_747 - View
Vaccinium macrocarpon vmacro07407 Similar to RPL10A: 60S ribosomal protein L10a (Oryza sativa subsp. japonica OX%3D39947) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro03317 Similar to RPL10AA: 60S ribosomal protein L10a-1 (Arabidopsis thaliana OX%3D3702) chr9_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1080G0696 CM024079.1 + View
Vitis vinifera GSVIVG01036128001 chr6 + View
Zea mays Zm00001eb147170 Zm00001e019205 Ribosomal protein 3 - View