Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG4G5770 | LG-4 | + | View | |
Acer truncatum | Atru.chr13.363 | chr13 | - | View | |
Acer truncatum | Atru.chr5.3111 | chr5 | + | View | |
Actinidia chinensis | Actinidia00564 | Lachesis_group12 | - | View | |
Actinidia chinensis | Actinidia27861 | Lachesis_group16 | + | View | |
Actinidia chinensis | Actinidia29799 | Lachesis_group27 | - | View | |
Actinidia chinensis | Actinidia02239 | Lachesis_group7 | + | View | |
Arabidopsis lyrata | AL2G35520 | scaffold_2 | + | View | |
Avicennia marina | MSTRG.22322 | ScioBoG_3008_HRSCAF_3015 | + | View | |
Avicennia marina | MSTRG.24267 | ScioBoG_4088_HRSCAF_4107 | - | View | |
Avicennia marina | MSTRG.25217 | ScioBoG_4119_HRSCAF_4138 | + | View | |
Avicennia marina | MSTRG.1228 | ScioBoG_102833_HRSCAF_103052 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.HNM84L | PF00643 - B-box zinc finger (zf-B_box) | arahy.Tifrunner.gnm1.Arahy.13 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.IJP2R9 | PF00643 - B-box zinc finger (zf-B_box) | arahy.Tifrunner.gnm1.Arahy.06 | + | View |
Arabidopsis thaliana | AT1G75540 | salt tolerance homolog2 Encodes a B-box zinc finger transcription factor BBX21 (also named STH2/salt tolerance homolog2 and LHUS/long hypocotyl under shade). Interacts with COP1 to control de-etiolation. Also genetically interacts with COP1 to regulate shade avoidance. salt tolerance homolog2 (STH2)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%2C zinc ion binding%3B LOCATED IN: intracellular%3B EXPRESSED IN: 16 plant structures%3B EXPRESSED DURING: 8 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C B-box (InterPro:IPR000315)%3B BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein (TAIR:AT4G39070.1)%3B Has 3177 Blast hits to 2249 proteins in 137 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 20%3B Fungi - 43%3B Plants - 2068%3B Viruses - 0%3B Other Eukaryotes - 1046 (source: NCBI BLink). | Chr1 | + | View |
Brassica carinata | BcaB05g24919 | ChrB05 | + | View | |
Brassica carinata | BcaC08g47339 | ChrC08 | - | View | |
Brassica carinata | BcaC03g15587 | ChrC03 | + | View | |
Brassica carinata | BcaC08g47036 | ChrC08 | + | View | |
Brassica napus | C06p32530 | C06 | - | View | |
Brassica napus | A07p28770 | A07 | - | View | |
Brassica napus | A02p20000 | A02 | + | View | |
Brassica napus | A07p41110 | A07 | + | View | |
Brassica napus | C06p49530 | C06 | + | View | |
Brassica rapa | BraA07t30518Z | A07 | - | View | |
Brassica rapa | BraA07t31647Z | A07 | + | View | |
Beta vulgaris | EL10Ac1g00560 | PF00643 - B-box zinc finger (zf-B_box) | Chr1_EL10_PGA_scaffold3 | - | View |
Capsicum annuum | CAN.G851.14 | PGAv.1.6.scaffold851 | - | View | |
Cannabis sativa | CANSAT25G1578 | NC_044370.1 | + | View | |
Cicer arietinum L. | Ca_20919_v3 | Ca_LG6_v3 | + | View | |
Cicer arietinum L. | Ca_13391_v3 | Ca_LG4_v3 | + | View | |
Corylus avellana | Haze_22580 | Similar to BBX21: B-box zinc finger protein 21 (Arabidopsis thaliana OX%3D3702) | 3 | + | View |
Coffea canephora | Cc10_g02140 | Putative Probable salt tolerance-like protein At1g75540 | chr10 | - | View |
Citrus clementina | Ciclev10001914m.g | scaffold_5 | + | View | |
Citrus clementina | Ciclev10029294m.g | scaffold_8 | + | View | |
Carpinus fangiana | Cfa005075 | Cfa02 | + | View | |
Cardamine hirsuta | CARHR068940 | Zinc finger protein CONSTANS-like protein | Chr2 | + | View |
Carya illinoinensis | CiPaw.05G071800 | PF00643 - B-box zinc finger (zf-B_box) | Chr05 | + | View |
Carya illinoinensis | CiPaw.07G154500 | PF00643 - B-box zinc finger (zf-B_box) | Chr07 | - | View |
Carya illinoinensis | CiPaw.08G062500 | PF00643 - B-box zinc finger (zf-B_box) | Chr08 | + | View |
Citrullus lanatus | ClCG01G020130 | Zinc finger family protein | CG_Chr01 | - | View |
Citrullus lanatus | ClCG08G014540 | B-box zinc finger family protein LENGTH=242 | CG_Chr08 | + | View |
Cucumis melo | MELO3C010985.2 | B-box zinc finger protein 20-like | chr03 | + | View |
Cucumis melo | MELO3C023341.2 | B-box zinc finger protein 21-like | chr11 | + | View |
Carica papaya | Cpa.g.sc6.219 | supercontig_6 | - | View | |
Chenopodium quinoa | AUR62034563 | BBX21: B-box zinc finger protein 21 | C_Quinoa_Scaffold_1522 | + | View |
Chenopodium quinoa | AUR62014436 | BBX21: B-box zinc finger protein 21 | C_Quinoa_Scaffold_1566 | - | View |
Capsella rubella | Carub.0002s2240 | PF00643 - B-box zinc finger (zf-B_box) | scaffold_2 | + | View |
Cucumis sativus L. | CsaV3_2G015160 | B-box zinc finger protein 21-like | chr2 | + | View |
Cucumis sativus L. | CsaV3_6G046900 | Zinc finger, B-box | chr6 | - | View |
Cucumis sativus L. | CsaV3_2G029230 | B-box zinc finger protein 20-like | chr2 | - | View |
Davidia involucrata | Dinv39482 | GWHABJS00000011 | + | View | |
Davidia involucrata | Dinv31808 | GWHABJS00000002 | - | View | |
Durio zibethinus | Duzib147G0457 | NW_019168470.1 | - | View | |
Durio zibethinus | Duzib093G1942 | NW_019167937.1 | + | View | |
Durio zibethinus | Duzib132G0058 | NW_019167915.1 | - | View | |
Durio zibethinus | Duzib116G0709 | NW_019167949.1 | - | View | |
Durio zibethinus | Duzib041G0183 | NW_019167826.1 | - | View | |
Durio zibethinus | Duzib248G0852 | NW_019168048.1 | + | View | |
Erigeron canadensis | ECA236G1807 | Conyza_canadensis_scaffold:3 | + | View | |
Erigeron canadensis | ECA232G4020 | Conyza_canadensis_scaffold:2 | + | View | |
Eucalyptus grandis | Eucgr.I02368 | Chr09 | + | View | |
Eucalyptus grandis | Eucgr.F01617 | Chr06 | + | View | |
Erythranthe guttata | Migut.C00787 | scaffold_3 | + | View | |
Eutrema salsugineum | Thhalv10018860m.g | PF00643 - B-box zinc finger (zf-B_box) | scaffold_9 | - | View |
Fragaria x ananassa | FAN20G1619 | PF00643 - B-box zinc finger (zf-B_box) | Fvb2-3 | - | View |
Fragaria x ananassa | FAN27G1259 | PF00643 - B-box zinc finger (zf-B_box) | Fvb2-1 | + | View |
Fragaria x ananassa | FAN15G1202 | PF00643 - B-box zinc finger (zf-B_box) | Fvb2-4 | - | View |
Fragaria vesca | FvH4_2g38990 | PF00643 - B-box zinc finger (zf-B_box) | Fvb2 | + | View |
Gossypium hirsutum | Gohir.A06G006200 | PF00643 - B-box zinc finger (zf-B_box) | A06 | - | View |
Gossypium hirsutum | Gohir.D05G191700 | PF00643 - B-box zinc finger (zf-B_box) | D05 | - | View |
Gossypium hirsutum | Gohir.D06G002100 | PF00643 - B-box zinc finger (zf-B_box) | D06 | - | View |
Gossypium hirsutum | Gohir.D02G097100 | PF00643 - B-box zinc finger (zf-B_box) | D02 | + | View |
Gossypium hirsutum | Gohir.A05G188600 | PF00643 - B-box zinc finger (zf-B_box) | A05 | - | View |
Gossypium hirsutum | Gohir.A13G030300 | PF00643 - B-box zinc finger (zf-B_box) | A13 | + | View |
Glycine max | Glyma.06G027000 | PF00643 - B-box zinc finger (zf-B_box) | Gm06 | - | View |
Glycine max | Glyma.04G027000 | PF00643 - B-box zinc finger (zf-B_box) | Gm04 | - | View |
Glycine max | Glyma.04G009200 | PF00643 - B-box zinc finger (zf-B_box) | Gm04 | - | View |
Glycine max | Glyma.17G255100 | PF00643 - B-box zinc finger (zf-B_box) | Gm17 | + | View |
Gossypium raimondii | Gorai.005G110700 | Chr05 | + | View | |
Gossypium raimondii | Gorai.010G006600 | Chr10 | - | View | |
Gossypium raimondii | Gorai.009G197000 | Chr09 | - | View | |
Helianthus annuus | HanXRQChr09g0269441 | Probable salt tolerance homolog2 | HanXRQChr09 | + | View |
Lupinus albus | Lalb_Chr23g0266301 | Lalb_Chr23 | - | View | |
Lupinus albus | Lalb_Chr19g0138891 | PF00643 - B-box zinc finger (zf-B_box) | Lalb_Chr19 | + | View |
Lupinus albus | Lalb_Chr14g0369681 | PF00643 - B-box zinc finger (zf-B_box) | Lalb_Chr14 | + | View |
Lupinus albus | Lalb_Chr11g0062071 | Lalb_Chr11 | - | View | |
Lonicera japonica | Lj4C30T2 | GWHAAZE00000004 | - | View | |
Lactuca sativa | Lsat_1_v5_gn_5_26000 | PF00643 - B-box zinc finger (zf-B_box) | Lsat_1_v8_lg_5 | - | View |
Lactuca sativa | Lsat_1_v5_gn_7_92040 | PF00643 - B-box zinc finger (zf-B_box) | Lsat_1_v8_lg_7 | + | View |
Malus domestica | MD08G1021000 | salt tolerance homolog2 | Chr08 | - | View |
Malus domestica | MD15G1018700 | salt tolerance homolog2 | Chr15 | - | View |
Manihot esculenta | Manes.11G087900 | Chromosome11 | - | View | |
Manihot esculenta | Manes.05G152700 | Chromosome05 | - | View | |
Medicago truncatula | Medtr1g023260 | salt tolerance-like protein | chr1 | + | View |
Medicago truncatula | Medtr4g071200 | salt tolerance-like protein | chr4 | + | View |
Medicago truncatula | Medtr3g113070 | salt tolerance-like protein | chr3 | + | View |
Nelumbo nucifera | Nn5g29192 | chr5 | + | View | |
Olea europaea | Oeu030396.1 | chr14 | - | View | |
Punica granatum | PGR119G1813 | NC_045132.1 | + | View | |
Punica granatum | PGR031G0930 | NC_045127.1 | - | View | |
Punica granatum | PGR083G2656 | NC_045133.1 | + | View | |
Prunus persica | Prupe.1G371100 | PF00643 - B-box zinc finger (zf-B_box) | Pp01 | - | View |
Pisum sativum | Psat5g013840 | B-box zinc finger | chr5LG3 | - | View |
Papaver somniferum | PSO675G7441 | NC_039358.1 | + | View | |
Papaver somniferum | PSO541G3090 | NC_039363.1 | + | View | |
Populus trichocarpa | Potri.004G161000 | PF00643 - B-box zinc finger (zf-B_box) | Chr04 | + | View |
Populus trichocarpa | Potri.005G117100 | PTHR31832//PTHR31832:SF5 - FAMILY NOT NAMED // B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN | Chr05 | + | View |
Populus trichocarpa | Potri.002G028200 | PF00643 - B-box zinc finger (zf-B_box) | Chr02 | - | View |
Populus trichocarpa | Potri.005G234500 | PF00643 - B-box zinc finger (zf-B_box) | Chr05 | + | View |
Phaseolus vulgaris | Phvul.001G009700 | PF00643 - B-box zinc finger (zf-B_box) | Chr01 | - | View |
Phaseolus vulgaris | Phvul.009G014100 | PF00643 - B-box zinc finger (zf-B_box) | Chr09 | + | View |
Phaseolus vulgaris | Phvul.003G260100 | PTHR31832:SF5 - B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN | Chr03 | - | View |
Quercus lobata | QL02p010676 | CM012294 | + | View | |
Rosa chinensis | RcHm_v2.0_Chr6g0302091 | RcHm_v2.0_Chr6 | + | View | |
Salvia bowleyana | SalBow8G2268 | GWHASIU00000004 | - | View | |
Salix brachista | Sabra05G0095900 | GWHAAZH00000005 | + | View | |
Salix brachista | Sabra09G0094200 | GWHAAZH00000009 | + | View | |
Salix brachista | Sabra02G0022200 | GWHAAZH00000002 | - | View | |
Salix brachista | Sabra05G0180800 | GWHAAZH00000005 | + | View | |
Salix brachista | Sabra04G0107700 | GWHAAZH00000004 | + | View | |
Sechium edule | Sed0018705 | LG01 | - | View | |
Sechium edule | Sed0025591 | LG11 | + | View | |
Sechium edule | Sed0009293 | LG10 | - | View | |
Sapria himalayana | SHI08099 | scaffold7_18583372 | - | View | |
Solanum lycopersicum | Solyc04g081020.3 | B-box zinc finger protein 24 (AHRD V3.3 *** A0A2G3CQV9_CAPCH) | SL4.0ch04 | + | View |
Solanum lycopersicum | Solyc01g110180.4 | Zinc finger, B-box (AHRD V3.3 *** A0A2U1KI66_ARTAN) | SL4.0ch01 | + | View |
Schrenkiella parvula | Sp5g30670 | PF00643 - B-box zinc finger (zf-B_box) | ch5-7 | + | View |
Solanum pennellii | Sopen01g052340 | B-box zinc finger family protein | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding | INVOLVED IN: response to karrikin, response to chitin, regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 10 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, B-box | BEST Arabidopsis thaliana protein match is: salt tolerance homolog2 | Spenn-ch01 | + | View |
Solanum pennellii | Sopen04g034630 | salt tolerance homolog2 (STH2) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding | LOCATED IN: intracellular | EXPRESSED IN: 16 plant structures | EXPRESSED DURING: 8 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, B-box | BEST Arabidopsis thaliana protein match is: B-box zinc finger family protein | Spenn-ch04 | + | View |
Solanum tuberosum | PGSC0003DMG400030958 | Zinc finger (B-box type) family protein | ST4.03ch01 | + | View |
Solanum tuberosum | PGSC0003DMG400003711 | COL domain class transcription factor | ST4.03ch04 | + | View |
Selenicereus undatus | Hund26870 | Scaffold_2055 | - | View | |
Selenicereus undatus | Hund17216 | Scaffold_33675 | + | View | |
Trochodendron aralioides | TAR628G1437 | group5 | + | View | |
Trochodendron aralioides | TAR625G1199 | group4 | - | View | |
Theobroma cacao | Thecc.08G037200 | Salt tolerance 2 | Chromosome_8 | + | View |
Tripterygium wilfordii | TWI31G0405 | NC_052233.1 | - | View | |
Tripterygium wilfordii | TWI36G0362 | NC_052237.1 | + | View | |
Utricularia gibba | unitig_578.g16086 | unitig_578 | + | View | |
Vaccinium macrocarpon | vmacro17442 | Similar to BBX21: B-box zinc finger protein 21 (Arabidopsis thaliana OX%3D3702) | chr3_Vaccinium_macrocarpon_Stevens_v1 | + | View |
Vigna mungo | VMungo1127G0983 | CM024076.1 | - | View | |
Vigna mungo | VMungo1309G0614 | CM024072.1 | + | View | |
Vitis vinifera | GSVIVG01009821001 | chr18 | + | View |