Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
---|---|---|---|---|---|
Aethionema arabicum | Aa31LG2G18930 | LG-2 | + | View | |
Arabidopsis lyrata | AL7G20640 | scaffold_7 | + | View | |
Avicennia marina | MSTRG.25776 | ScioBoG_4119_HRSCAF_4138 | - | View | |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.DFD6U9 | K14816 - pre-60S factor REI1 (REI1) | arahy.Tifrunner.gnm1.Arahy.16 | + | View |
Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.P9WJGS | K14816 - pre-60S factor REI1 (REI1) | arahy.Tifrunner.gnm1.Arahy.16 | + | View |
Arabidopsis thaliana | AT4G31420 | Zinc finger protein 622 Zinc finger protein 622%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Zinc finger protein 622%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%3B LOCATED IN: intracellular%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C C2H2-like (InterPro:IPR015880)%2C Zinc finger%2C C2H2-type (InterPro:IPR007087)%3B BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 (TAIR:AT2G24500.1)%3B Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798%3B Bacteria - 22429%3B Metazoa - 974%3B Fungi - 991%3B Plants - 531%3B Viruses - 0%3B Other Eukaryotes - 9610 (source: NCBI BLink). | Chr4 | - | View |
Brassica carinata | BcaC09g51921 | ChrC09 | - | View | |
Brassica napus | C04p54110 | C04 | + | View | |
Brassica rapa | BraA01t00637Z | A01 | + | View | |
Cannabis sativa | CANSAT25G1292 | NC_044370.1 | - | View | |
Carpinus fangiana | Cfa013262 | Cfa05 | - | View | |
Cardamine hirsuta | CARHR239300 | Zinc finger protein 622 | Chr7 | - | View |
Cardamine hirsuta | CARHR117530 | Zinc finger protein 622 | Chr4 | + | View |
Carya illinoinensis | CiPaw.08G019100 | K14816 - pre-60S factor REI1 (REI1) | Chr08 | - | View |
Carica papaya | Cpa.g.sc23.4 | supercontig_23 | - | View | |
Chenopodium quinoa | AUR62020613 | SPCC550.15c: Cytoplasmic 60S subunit biogenesis factor SPCC550.15c | C_Quinoa_Scaffold_3966 | + | View |
Capsella rubella | Carub.0004s0384 | K14816 - pre-60S factor REI1 (REI1) | scaffold_4 | - | View |
Capsella rubella | Carub.0007s0914 | K14816 - pre-60S factor REI1 (REI1) | scaffold_7 | + | View |
Durio zibethinus | Duzib168G2376 | NW_019168159.1 | - | View | |
Eucalyptus grandis | Eucgr.C04005 | Chr03 | + | View | |
Erythranthe guttata | Migut.A00439 | scaffold_1 | + | View | |
Eutrema salsugineum | Thhalv10025366m.g | PTHR13182:SF8 - ZINC FINGER PROTEIN 622 | scaffold_1 | + | View |
Fragaria vesca | FvH4_2g36910 | K14816 - pre-60S factor REI1 (REI1) | Fvb2 | + | View |
Malus domestica | MD08G1131000 | Zinc finger protein 622 | Chr08 | + | View |
Manihot esculenta | Manes.16G136200 | Chromosome16 | + | View | |
Medicago truncatula | Medtr1g009770 | C2H2-type zinc finger protein | chr1 | + | View |
Olea europaea | Oeu018570.1 | scaffold1784 | + | View | |
Punica granatum | PGR044G2213 | NC_045134.1 | - | View | |
Populus trichocarpa | Potri.006G275300 | K14816 - pre-60S factor REI1 (REI1) | Chr06 | + | View |
Phaseolus vulgaris | Phvul.001G058800 | K14816 - pre-60S factor REI1 (REI1) | Chr01 | - | View |
Rhododendron simsii | Rhsim07G0170500 | chr07 | + | View | |
Salvia bowleyana | SalBow4G1160 | GWHASIU00000008 | - | View | |
Salix brachista | Sabra06G0213100 | GWHAAZH00000006 | + | View | |
Schrenkiella parvula | Sp4g03510 | K14816 - pre-60S factor REI1 (REI1) | ch4-2 | - | View |
Schrenkiella parvula | Sp7g29280 | PTHR13182//PTHR13182:SF8 - ZINC FINGER PROTEIN 622 // ZINC FINGER PROTEIN 622 | ch7-5 | - | View |
Solanum pennellii | Sopen12g032280 | Zinc finger protein 622 | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription | LOCATED IN: intracellular | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, C2H2-like , Zinc finger, C2H2-type | BEST Arabidopsis thaliana protein match is: Zinc finger protein 622 | Spenn-ch12 | + | View |
Tarenaya hassleriana | THA.LOC104803597 | cytoplasmic 60S subunit biogenesis factor REI1 homolog 1 | NW_010971389.1 | - | View |