Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold36G14363 scaffold36 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr5.1287 chr5 - View
Actinidia chinensis Actinidia00703 Lachesis_group19 + View
Avicennia marina MSTRG.12592 ScioBoG_17730_HRSCAF_17811 + View
Arabidopsis thaliana AT4G03120 C2H2 and C2HC zinc fingers superfamily protein C2H2 and C2HC zinc fingers superfamily protein%3B FUNCTIONS IN: zinc ion binding%2C nucleic acid binding%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Zinc finger%2C U1-C type (InterPro:IPR013085)%2C Zinc finger%2C U1-type (InterPro:IPR003604)%2C Zinc finger%2C C2H2-type matrin (InterPro:IPR000690)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 + View
Cicer arietinum L. Ca_09109_v3 Ca_LG3_v3 + View
Cicer arietinum L. Ca_10377_v3 Ca_LG4_v3 - View
Corylus avellana Haze_04804 Similar to VIT_07s0104g01170: U1 small nuclear ribonucleoprotein C (Vitis vinifera OX%3D29760) 2 + View
Coffea canephora Cc01_g20160 U1 small nuclear ribonucleoprotein C chr1 + View
Citrus clementina Ciclev10022350m.g scaffold_3 + View
Ceratophyllum demersum CDE11G0890 9 + View
Carya illinoinensis CiPaw.07G099200 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Chr07 + View
Carya illinoinensis CiPaw.08G100800 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Chr08 - View
Citrullus lanatus ClCG09G006530 U1 small nuclear ribonucleoprotein C CG_Chr09 - View
Cucumis melo MELO3C015891.2 U1 small nuclear ribonucleoprotein C chr01 + View
Carica papaya Cpa.g.sc9.157 supercontig_9 + View
Cucumis sativus L. CsaV3_7G028310 U1 small nuclear ribonucleoprotein C chr7 - View
Daucus carota DCAR_012430 hypothetical protein DCARv2_Chr3 - View
Davidia involucrata Dinv11297 GWHABJS00000007 + View
Durio zibethinus Duzib138G0197 NW_019167893.1 + View
Durio zibethinus Duzib211G0369 NW_019168049.1 - View
Erigeron canadensis ECA248G2178 Conyza_canadensis_scaffold:9 + View
Erigeron canadensis ECA247G2101 Conyza_canadensis_scaffold:7 + View
Erythranthe guttata Migut.N02118 scaffold_14 - View
Fragaria x ananassa FAN15G3346 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Fvb2-4 + View
Fragaria x ananassa FAN27G0391 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Fvb2-1 + View
Fragaria x ananassa FAN24G2968 PTHR31148:SF1 - U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C Fvb2-2 - View
Fragaria x ananassa FAN20G1534 PTHR31148//PTHR31148:SF1 - FAMILY NOT NAMED // U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C Fvb2-3 - View
Fragaria vesca FvH4_2g24650 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Fvb2 + View
Gossypium hirsutum Gohir.A11G118400 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) A11 - View
Gossypium hirsutum Gohir.A08G043900 PTHR31148//PTHR31148:SF1 - FAMILY NOT NAMED // U1 SMALL NUCLEAR RIBONUCLEOPROTEIN C A08 - View
Glycine max Glyma.02G152300 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Gm02 + View
Glycine max Glyma.10G021900 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Gm10 - View
Gossypium raimondii Gorai.004G053600 Chr04 - View
Gossypium raimondii Gorai.007G132200 Chr07 - View
Lupinus albus Lalb_Chr02g0143061 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Lalb_Chr02 + View
Lotus japonicus Lj5g0005016 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) chr5 + View
Lonicera japonica Lj2P1184T34 GWHAAZE00000002 + View
Lonicera japonica Lj3A810T51 GWHAAZE00000003 + View
Lactuca sativa Lsat_1_v5_gn_5_188760 Lsat_1_v8_lg_5 + View
Malus domestica MD11G1297300 C2H2 and C2HC zinc fingers superfamily protein Chr11 + View
Malus domestica MD03G1275200 C2H2 and C2HC zinc fingers superfamily protein Chr03 + View
Manihot esculenta Manes.01G213100 Chromosome01 + View
Manihot esculenta Manes.05G068800 Chromosome05 - View
Medicago truncatula Medtr7g107640 U1 small nuclear C-like ribonucleoprotein chr7 + View
Medicago truncatula Medtr1g088990 U1 small nuclear C-like ribonucleoprotein chr1 - View
Nicotiana tabacum Nitab4.5_0000295g0050 Zinc finger, U1-C type, U1 small nuclear ribonucleoprotein C, Zinc finger, U1-type, Zinc finger, C2H2-type matrin Nitab4.5_0000295 + View
Prunus persica Prupe.8G251800 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Pp08 + View
Phaseolus vulgaris Phvul.007G166600 K11095 - U1 small nuclear ribonucleoprotein C (SNRPC) Chr07 - View
Rosa chinensis RcHm_v2.0_Chr6g0292481 RcHm_v2.0_Chr6 + View
Rhododendron simsii Rhsim13G0017700 chr13 - View
Salvia bowleyana SalBow6G6913 GWHASIU00000002 + View
Sechium edule Sed0008045 LG09 + View
Solanum lycopersicum Solyc06g008860.3 u1 small nuclear ribonucleoprotein C SL4.0ch06 - View
Solanum pennellii Sopen06g003610 C2H2 and C2HC zinc fingers superfamily protein | FUNCTIONS IN: zinc ion binding, nucleic acid binding | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Zinc finger, U1-C type , Zinc finger, U1-type , Zinc finger, C2H2-type matrin Spenn-ch06 - View
Trochodendron aralioides TAR636G1159 group1 + View
Trochodendron aralioides TAR636G2878 group1 + View
Trochodendron aralioides TAR365G0683 group16 + View
Trochodendron aralioides TAR362G1277 group17 - View
Tarenaya hassleriana THA.LOC104817532 LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein C-like NW_010965946.1 - View
Tripterygium wilfordii TWI14G0352 NC_052249.1 - View
Tripterygium wilfordii TWI23G0547 NC_052239.1 - View
Vaccinium macrocarpon vmacro02511 Similar to VIT_07s0104g01170: U1 small nuclear ribonucleoprotein C (Vitis vinifera OX%3D29760) chr9_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0720G0802 CM024071.1 + View
Vitis vinifera GSVIVG01011011001 chr7 + View