Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr10.1798 chr10 + View
Acer truncatum Atru.chr6.2869 chr6 + View
Actinidia chinensis Actinidia07602 Lachesis_group6 + View
Actinidia chinensis Actinidia10999 Lachesis_group19 + View
Actinidia chinensis Actinidia26141 Lachesis_group17 - View
Arabidopsis lyrata AL1G42050 scaffold_1 + View
Avicennia marina MSTRG.7359 ScioBoG_102840_HRSCAF_103099 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DG2K05 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) arahy.Tifrunner.gnm1.Arahy.10 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.49JRJ0 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) arahy.Tifrunner.gnm1.Arahy.13 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.1H2VR5 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P48F6M PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) arahy.Tifrunner.gnm1.Arahy.20 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.31J8XM PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.G6BTL7 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) arahy.Tifrunner.gnm1.Arahy.13 - View
Arabidopsis thaliana AT1G28420 homeobox-1 homeobox-1 (HB-1)%3B FUNCTIONS IN: sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%2C regulation of transcription%3B LOCATED IN: nucleus%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: DDT domain superfamily (InterPro:IPR018501)%2C Homeobox (InterPro:IPR001356)%2C DDT domain (InterPro:IPR004022)%2C DDT domain%2C subgroup (InterPro:IPR018500)%2C Homeodomain-like (InterPro:IPR009057)%2C Homeodomain-related (InterPro:IPR012287)%3B BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator (TAIR:AT5G44180.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC06g35369 ChrC06 + View
Brassica napus C07p16880 C07 - View
Brassica napus A07p11210 A07 - View
Brassica napus A09p37620 A09 - View
Brassica napus C05p27430 C05 + View
Brassica napus A08p25510 A08 - View
Brassica napus C03p75250 C03 + View
Brassica oleracea BolC7t42194H C7 - View
Brassica oleracea BolC3t19784H C3 + View
Brassica oleracea BolC5t31459H C5 + View
Brassica rapa BraA07t28913Z A07 - View
Brassica rapa BraA09t39272Z A09 - View
Brassica rapa BraA08t34505Z A08 - View
Camellia sinensis var. sinensis CSS0043150 PREDICTED: uncharacterized protein LOC100247033 isoform X2 [Vitis vinifera] Chr8 - View
Camellia sinensis var. sinensis CSS0016347 PREDICTED: uncharacterized protein LOC100250601 isoform X2 [Vitis vinifera] Chr7 - View
Capsicum annuum CAN.G529.57 PGAv.1.6.scaffold529 - View
Cannabis sativa CANSAT35G2047 NC_044378.1 - View
Cannabis sativa CANSAT64G0141 NC_044379.1 - View
Cicer arietinum L. Ca_18919_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_18589_v3 Ca_LG6_v3 - View
Cicer arietinum L. Ca_00363_v3 Ca_LG1_v3 - View
Corylus avellana Haze_13244 Similar to RLT2: Homeobox-DDT domain protein RLT2 (Arabidopsis thaliana OX%3D3702) 5 - View
Corylus avellana Haze_06382 Similar to RLT1: Homeobox-DDT domain protein RLT1 (Arabidopsis thaliana OX%3D3702) 2 + View
Coffea canephora Cc02_g13850 Putative homeobox-1 chr2 - View
Citrus clementina Ciclev10014023m.g scaffold_2 - View
Citrus clementina Ciclev10018240m.g scaffold_2 - View
Ceratophyllum demersum CDE02G2880 1 + View
Carpinus fangiana Cfa000527 Cfa01 - View
Cardamine hirsuta CARHR027930 Homeobox-1 Chr1 + View
Carya illinoinensis CiPaw.03G181600 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Chr03 - View
Carya illinoinensis CiPaw.09G063400 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Chr09 - View
Citrullus lanatus ClCG01G023260 Homeobox protein, putative CG_Chr01 - View
Cucumis melo MELO3C007260.2 homeobox-DDT domain protein RLT1 isoform X1 chr08 + View
Carica papaya Cpa.g.sc83.96 supercontig_83 - View
Capsella rubella Carub.0001s2690 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) scaffold_1 + View
Cucumis sativus L. CsaV3_6G050410 Homeobox domain-containing protein/DDT domain-containing protein chr6 - View
Daucus carota DCAR_007998 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_004044 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv17354 GWHABJS00000020 + View
Davidia involucrata Dinv06859 GWHABJS00000013 - View
Durio zibethinus Duzib160G0499 NW_019168015.1 + View
Durio zibethinus Duzib235G0176 NW_019167982.1 + View
Eucalyptus grandis Eucgr.K01058 Chr11 - View
Erythranthe guttata Migut.M01107 scaffold_13 + View
Erythranthe guttata Migut.H01470 scaffold_8 + View
Eutrema salsugineum Thhalv10006543m.g PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) scaffold_5 - View
Fragaria x ananassa FAN16G2831 PF00046//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Fvb3-3 + View
Fragaria x ananassa FAN25G1066 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Fvb3-1 - View
Fragaria vesca FvH4_3g08620 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Fvb3 + View
Glycine max Glyma.13G175200 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Gm13 + View
Glycine max Glyma.07G201200 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Gm07 - View
Glycine max Glyma.13G235300 PTHR24326:SF290 - GB|AAF16763.1-RELATED Gm13 + View
Glycine max Glyma.06G288900 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Gm06 + View
Lupinus albus Lalb_Chr15g0089681 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Lalb_Chr15 + View
Lupinus albus Lalb_Chr16g0384011 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Lalb_Chr16 + View
Lupinus albus Lalb_Chr20g0121581 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Lalb_Chr20 + View
Lotus japonicus Lj6g0010323 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) chr6 + View
Lotus japonicus Lj4g0015660 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) chr4 + View
Lotus japonicus Lj3g0019816 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) chr3 + View
Lonicera japonica Lj2C292T8 GWHAAZE00000002 - View
Lactuca sativa Lsat_1_v5_gn_7_22781 PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Lsat_1_v8_lg_7 - View
Malus domestica MD10G1289100 homeobox-1 Chr10 + View
Malus domestica MD05G1310200 homeobox-1 Chr05 + View
Manihot esculenta Manes.17G049300 Chromosome17 - View
Medicago truncatula Medtr4g078860 homeodomain transcriptional regulator chr4 - View
Medicago truncatula Medtr2g014490 homeobox domain protein chr2 - View
Nelumbo nucifera Nn1g04237 chr1 - View
Nicotiana tabacum Nitab4.5_0000621g0070 DDT domain, subgroup, Homeobox domain, DNA-directed RNA polymerase delta subunit/Asxl, DDT domain superfamily, DDT domain, Homeodomain-like Nitab4.5_0000621 + View
Punica granatum PGR142G1802 NC_045128.1 + View
Punica granatum PGR004G2384 NC_045131.1 + View
Prunus persica Prupe.4G052600 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) Pp04 - View
Pisum sativum Psat1g202960 Homeobox domain chr1LG6 + View
Papaver somniferum PSO210G6356 NC_039359.1 + View
Populus trichocarpa Potri.004G048675 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Chr04 - View
Populus trichocarpa Potri.011G057700 PF00046//PF02791//PF05066//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Chr11 - View
Phaseolus vulgaris Phvul.006G182000 PF00046//PF02791//PF05066//PF15612//PF15613//PF15614 - Homeobox domain (Homeobox) // DDT domain (DDT) // HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) // WSTF, HB1, Itc1p, MBD9 motif 1 (WHIM1) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Chr06 + View
Rosa chinensis RcHm_v2.0_Chr5g0009221 RcHm_v2.0_Chr5 - View
Rhododendron simsii Rhsim02G0134900 chr02 - View
Rhododendron simsii Rhsim06G0136900 chr06 + View
Salvia bowleyana SalBow7G2291 GWHASIU00000005 - View
Salix brachista Sabra04G0030600 GWHAAZH00000004 - View
Salix brachista Sabra07G0109800 GWHAAZH00000007 + View
Salix brachista Sabra11G0039900 GWHAAZH00000011 - View
Sechium edule Sed0010792 LG10 + View
Sechium edule Sed0000156 LG14 - View
Solanum lycopersicum Solyc07g053610.3 Homeobox domain-containing protein/DDT domain-containing protein (AHRD V3.3 *** A0A1Q3C1K9_CEPFO) SL4.0ch07 + View
Solanum lycopersicum Solyc02g077660.3 Homeobox domain-containing protein/DDT domain-containing protein (AHRD V3.3 *** A0A1Q3AXQ1_CEPFO) SL4.0ch02 + View
Solanum lycopersicum Solyc11g006200.2 Homeobox domain-containing protein/DDT domain-containing protein (AHRD V3.3 *** A0A1Q3BK61_CEPFO) SL4.0ch11 + View
Schrenkiella parvula Sp1g24700 PF05066 - HB1, ASXL, restriction endonuclease HTH domain (HARE-HTH) ch1-1 + View
Solanum pennellii Sopen07g027560 Homeodomain-like transcriptional regulator | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DDT domain superfamily , Homeobox , DDT domain , Homeodomain-like , DDT domain, subgroup , Homeodomain-related | BEST Arabidopsis thaliana protein match is: homeobox-1 . Spenn-ch07 + View
Solanum pennellii Sopen02g022560 homeobox-1 (HB-1) | FUNCTIONS IN: sequence-specific DNA binding transcription factor activity | INVOLVED IN: regulation of transcription, DNA-dependent, regulation of transcription | LOCATED IN: nucleus | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: DDT domain superfamily , Homeobox , DDT domain , DDT domain, subgroup , Homeodomain-like , Homeodomain-related | BEST Arabidopsis thaliana protein match is: Homeodomain-like transcriptional regulator Spenn-ch02 + View
Solanum tuberosum PGSC0003DMG400031766 Homeobox protein ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400009397 Homeobox protein ST4.03ch07 - View
Trochodendron aralioides TAR627G0298 group6 + View
Trochodendron aralioides TAR626G0101 group3 - View
Theobroma cacao Thecc.06G181000 Homeodomain-like transcriptional regulator Chromosome_6 + View
Theobroma cacao Thecc.02G186300 Homeodomain-like transcriptional regulator Chromosome_2 - View
Tarenaya hassleriana THA.LOC104814231 homeobox-DDT domain protein RLT1-like NW_010965451.1 + View
Trifolium pratense TPR.G11655 Tp57577_TGAC_v2_LG4 + View
Tripterygium wilfordii TWI38G1950 NC_052252.1 - View
Tripterygium wilfordii TWI14G1311 NC_052249.1 + View
Tripterygium wilfordii TWI23G0951 NC_052239.1 - View
Tripterygium wilfordii TWI38G1102 NC_052252.1 - View
Vigna mungo VMungo0540G1437 CM024075.1 - View
Vitis vinifera GSVIVG01021113001 chr10 - View
Vitis vinifera GSVIVG01020605001 chr12 + View
Zea mays Zm00001eb157190 Zm00001e020198 Homeobox-DDT domain protein RLT1 3 - View