Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold205G41707 scaffold205 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr9.2442 chr9 + View
Acer truncatum Atru.chr6.2187 chr6 + View
Arabidopsis lyrata AL6G25640 scaffold_6 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.VR06A8 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED arahy.Tifrunner.gnm1.Arahy.06 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.DHK18D KOG0500 - Cyclic nucleotide-gated cation channel CNGA1-3 and related proteins arahy.Tifrunner.gnm1.Arahy.05 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.A958VF PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED arahy.Tifrunner.gnm1.Arahy.16 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QVT58A KOG0498 - K+-channel ERG and related proteins, contain PAS/PAC sensor domain arahy.Tifrunner.gnm1.Arahy.15 + View
Arabidopsis thaliana AT5G14870 cyclic nucleotide-gated channel 18 Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery. cyclic nucleotide-gated channel 18 (CNGC18)%3B CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595)%2C Cyclic nucleotide-binding-like (InterPro:IPR018490)%2C RmlC-like jelly roll fold (InterPro:IPR014710)%3B BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 16 (TAIR:AT3G48010.1)%3B Has 3357 Blast hits to 3225 proteins in 243 species: Archae - 0%3B Bacteria - 71%3B Metazoa - 1532%3B Fungi - 0%3B Plants - 967%3B Viruses - 0%3B Other Eukaryotes - 787 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaB08g36943 ChrB08 + View
Brassica carinata BcaC04g19005 ChrC04 + View
Brassica napus A10p23860 A10 + View
Brassica napus C09p62340 C09 + View
Brassica oleracea BolC9t59071H C9 + View
Brassica rapa BraA10t44450Z A10 + View
Camellia sinensis var. sinensis CSS0043516 PREDICTED: putative cyclic nucleotide-gated ion channel 18 [Vitis vinifera] Chr1 - View
Camellia sinensis var. sinensis CSS0035897 Cyclic nucleotide-gated channel 16 [Theobroma cacao] Chr15 - View
Capsicum annuum CAN.G206.40 PGAv.1.6.scaffold206 - View
Cannabis sativa CANSAT64G2997 NC_044379.1 + View
Corylus avellana Haze_14657 Similar to CNGC18: Cyclic nucleotide-gated ion channel 18 (Arabidopsis thaliana OX%3D3702) 5 + View
Corylus avellana Haze_07492 Similar to CNGC16: Probable cyclic nucleotide-gated ion channel 16 (Arabidopsis thaliana OX%3D3702) 4 + View
Citrus clementina Ciclev10017632m.g scaffold_2 + View
Citrus clementina Ciclev10024139m.g scaffold_3 + View
Carpinus fangiana Cfa007441 Cfa03 - View
Carpinus fangiana Cfa019094 Cfa08 + View
Cardamine hirsuta CARHR198480 cyclic nucleotide-gated channel 18 Chr6 + View
Carya illinoinensis CiPaw.03G036700 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Chr03 + View
Carya illinoinensis CiPaw.11G028700 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Chr11 - View
Citrullus lanatus ClCG10G014350 cyclic nucleotide-gated channel 18 LENGTH=706 CG_Chr10 - View
Citrullus lanatus ClCG06G016900 cyclic nucleotide-gated channel 15 LENGTH=678 CG_Chr06 + View
Cucumis melo MELO3C009944.2 Cyclic nucleotide-gated ion channel-like protein chr04 - View
Capsella rubella Carub.0006s1302 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED scaffold_6 - View
Cucumis sativus L. CsaV3_1G001610 Cyclic nucleotide-gated channel chr1 - View
Cucumis sativus L. CsaV3_3G042240 Cyclic nucleotide-gated channel chr3 + View
Daucus carota DCAR_021677 hypothetical protein DCARv2_Chr6 - View
Davidia involucrata Dinv33506 GWHABJS00000014 - View
Durio zibethinus Duzib084G1280 NW_019167827.1 - View
Durio zibethinus Duzib264G0783 NW_019167960.1 - View
Erigeron canadensis ECA232G2332 Conyza_canadensis_scaffold:2 + View
Eucalyptus grandis Eucgr.J02184 Chr10 + View
Eucalyptus grandis Eucgr.B00356 Chr02 + View
Erythranthe guttata Migut.H00137 scaffold_8 - View
Eutrema salsugineum Thhalv10012806m.g PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED scaffold_2 - View
Fragaria x ananassa FAN14G4178 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Fvb6-1 + View
Fragaria x ananassa FAN05G2323 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Fvb6-3 - View
Fragaria x ananassa FAN09G1515 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Fvb6-2 - View
Fragaria x ananassa FAN02G4564 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Fvb6-4 + View
Fragaria vesca FvH4_6g50510 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Fvb6 + View
Gossypium hirsutum Gohir.A05G360100 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED A05 - View
Gossypium hirsutum Gohir.D04G054200 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED D04 + View
Glycine max Glyma.06G184000 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Gm06 - View
Glycine max Glyma.04G181000 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Gm04 + View
Gossypium raimondii Gorai.012G095800 Chr12 - View
Gossypium raimondii Gorai.012G060800 Chr12 + View
Helianthus annuus HanXRQChr09g0265931 Probable cyclic nucleotide-gated channel 18 HanXRQChr09 - View
Hydrangea macrophylla Hma1.2p1_0967F.1_g242280 Hma1.2p1_0967F.1 - View
Lotus japonicus Lj1g0022232 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED chr1 + View
Lotus japonicus Lj1g0004395 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED chr1 - View
Lonicera japonica Lj9A451G94 GWHAAZE00000009 - View
Lonicera japonica Lju41C33T7 GWHAAZE00000094 + View
Lactuca sativa Lsat_1_v5_gn_4_181481 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Lsat_1_v8_lg_4 + View
Malus domestica MD09G1035800 cyclic nucleotide-gated channel 18 Chr09 - View
Malus domestica MD14G1183500 cyclic nucleotide-gated channel 16 Chr14 - View
Malus domestica MD06G1177300 cyclic nucleotide-gated channel 16 Chr06 - View
Malus domestica MD17G1037400 cyclic nucleotide-gated channel 18 Chr17 - View
Manihot esculenta Manes.17G123100 Chromosome17 - View
Nelumbo nucifera Nn4g22823 chr4 - View
Nelumbo nucifera Nn3g16916 chr3 - View
Nicotiana tabacum Nitab4.5_0001952g0030 Cyclic nucleotide-binding domain, RmlC-like jelly roll fold, Potassium channel, voltage-dependent, EAG/ELK/ERG, Ion transport domain, Cyclic nucleotide-binding-like Nitab4.5_0001952 - View
Olea europaea Oeu062911.1 scaffold921 + View
Petunia axillaris Peaxi162Scf00129g01036 cyclic nucleotide-gated channel 18 Peaxi162Scf00129 + View
Punica granatum PGR083G1066 NC_045133.1 + View
Punica granatum PGR083G1525 NC_045133.1 - View
Prunus persica Prupe.5G176000 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Pp05 - View
Prunus persica Prupe.3G282200 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Pp03 + View
Phaseolus vulgaris Phvul.009G180000 PTHR10217:SF479 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED Chr09 - View
Quercus lobata QL10p012174 10 - View
Quercus lobata QL02p076980 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0170931 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr7g0193861 RcHm_v2.0_Chr7 - View
Rhododendron simsii Rhsim10G0023400 chr10 - View
Rhododendron simsii Rhsim08G0170300 chr08 + View
Salvia bowleyana SalBow1G2086 GWHASIU00000001 - View
Sechium edule Sed0011197 LG08 - View
Sechium edule Sed0025994 LG06 - View
Solanum lycopersicum Solyc02g086990.4 Cyclic nucleotide-gated ion channel-like protein (AHRD V3.3 *** A0A2K3MW13_TRIPR) SL4.0ch02 - View
Solanum lycopersicum Solyc03g114110.4 Cyclic nucleotide-gated channel 16 (AHRD V3.3 *** A0A2U1QP75_ARTAN) SL4.0ch03 - View
Schrenkiella parvula Sp6g29210 PTHR10217//PTHR10217:SF479 - VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL // CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED ch6-6 + View
Solanum pennellii Sopen03g033170 member of Cyclic nucleotide gated channel family | cyclic nucleotide-gated channel 16 (CNGC16) | FUNCTIONS IN: ion channel activity, cyclic nucleotide binding, calmodulin binding | INVOLVED IN: ion transport, transmembrane transport | LOCATED IN: membrane | EXPRESSED IN: male gametophyte, flower, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis | CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding , Ion transport , Cyclic nucleotide-binding-like , RmlC-like jelly roll fold | BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 18 Spenn-ch03 - View
Solanum pennellii Sopen02g031760 Encodes a member of the cyclic nucleotide gated channel family that is asymmetrically localized to the plasma membrane at the growing tip of the pollen tube and is involved in pollen tube growth. It likely directly transduces a cNMP signal into an ion flux that can produce a localized signal capable of regulating the pollen tip-growth machinery. | cyclic nucleotide-gated channel 18 (CNGC18) | CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding , Cyclic nucleotide-binding-like , RmlC-like jelly roll fold | BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 16 Spenn-ch02 - View
Solanum tuberosum PGSC0003DMG400000529 Cyclic nucleotide-gated ion channel 18 ST4.03ch02 + View
Solanum tuberosum PGSC0003DMG400024591 Cyclic nucleotide-gated ion channel 16 ST4.03ch03 - View
Trochodendron aralioides TAR374G0952 group12 + View
Theobroma cacao Thecc.04G007400 Cyclic nucleotide-gated channel 18 Chromosome_4 + View
Theobroma cacao Thecc.03G009200 Cyclic nucleotide-gated channel 16 Chromosome_3 + View
Tarenaya hassleriana THA.LOC104821065 cyclic nucleotide-gated ion channel 18 NW_010966372.1 - View
Tripterygium wilfordii TWI56G0832 NC_052242.1 + View
Vaccinium macrocarpon vmacro19371 Similar to CNGC18: Cyclic nucleotide-gated ion channel 18 (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro05813 Similar to CNGC18: Cyclic nucleotide-gated ion channel 18 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 + View
Vigna mungo VMungo1383G0917 CM024070.1 + View
Vigna mungo VMungo1309G2890 CM024072.1 - View
Vitis vinifera GSVIVG01007786001 chr17 + View
Vitis vinifera GSVIVG01032502001 chr14 - View