Gene: AT5G14870

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G14870
  • Transcript Identifier AT5G14870.1
  • Gene Type Coding gene
  • Location Chr5 : 4808268-4810897 : negative

Gene Family Information

  • ID HOM05D000122
  • #Genes/#Species 2793/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G14870.1
  • symbol CNGC18
  • Alias ATCNGC18,CYCLIC NUCLEOTIDE-GATED CHANNEL 18
  • uniprot Q9LEQ3

Descriptions

  • Description cyclic nucleotide-gated channel 18
  • Computational description cyclic nucleotide-gated channel 18 (CNGC18); CONTAINS InterPro DOMAIN/s: Cyclic nucleotide-binding (InterPro:IPR000595), Cyclic nucleotide-binding-like (InterPro:IPR018490), RmlC-like jelly roll fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is: cyclic nucleotide-gated channel 16 (TAIR:AT3G48010.1); Has 3357 Blast hits to 3225 proteins in 243 species: Archae - 0; Bacteria - 71; Metazoa - 1532; Fungi - 0; Plants - 967; Viruses - 0; Other Eukaryotes - 787 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0055085
IEA
GOA Databasetransmembrane transport
GO:0055085
IEA
InterProtransmembrane transport
GO:0006811
IEA
GOA Databaseion transport
GO:0006811
IEA
InterProion transport
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0070588
IEA
GOA Databasecalcium ion transmembrane transport
GO:0070588
IDA
Gene Ontologycalcium ion transmembrane transport1
GO:0009860
IMP
Gene Ontologypollen tube growth2
GO:0006874
IDA
Gene Ontologycellular calcium ion homeostasis2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005216
IEA
GOA Databaseion channel activity
GO:0005216
IEA
InterProion channel activity
GO:0005516
IEA
GOA Databasecalmodulin binding
GO:0030552
IEA
GOA DatabasecAMP binding
GO:0030553
IEA
GOA DatabasecGMP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0005262
IDA
Gene Ontologycalcium channel activity1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0031410
IEA
GOA Databasecytoplasmic vesicle
GO:0009507
ISM
Gene Ontologychloroplast
GO:0005886
IEA
GOA Databaseplasma membrane
GO:0030659
IEA
GOA Databasecytoplasmic vesicle membrane
GO:0016324
IDA
Gene Ontologyapical plasma membrane2

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR018490 Cyclic nucleotide-binding-like
IPR000595 Cyclic nucleotide-binding domain
IPR005821 Ion transport domain
IPR014710 RmlC-like jelly roll fold
Mapman id Description
24.3.2.4 Solute transport.channels.VIC superfamily.cyclic nucleotide-gated cation channel (CNGC)