Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
SGA_v2.0_scaffold17G08112 scaffold17 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Actinidia chinensis Actinidia39848 Lachesis_group17 - View
Arabidopsis lyrata AL5G41350 scaffold_5 + View
Arabidopsis lyrata AL1G15940 scaffold_1 + View
Arabidopsis thaliana AT1G05990 EF hand calcium-binding protein family EF hand calcium-binding protein family%3B FUNCTIONS IN: calcium ion binding%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: root hair%3B CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080)%2C EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1)%3B Has 27146 Blast hits to 18777 proteins in 1639 species: Archae - 2%3B Bacteria - 228%3B Metazoa - 11784%3B Fungi - 5059%3B Plants - 5970%3B Viruses - 0%3B Other Eukaryotes - 4103 (source: NCBI BLink). Chr1 + View
Arabidopsis thaliana AT3G59440 Calcium-binding EF-hand family protein Calcium-binding EF-hand family protein%3B FUNCTIONS IN: calcium ion binding%3B INVOLVED IN: biological_process unknown%3B LOCATED IN: endomembrane system%3B EXPRESSED IN: root%3B CONTAINS InterPro DOMAIN/s: EF-Hand 1%2C calcium-binding site (InterPro:IPR018247)%2C EF-HAND 2 (InterPro:IPR018249)%2C EF-hand-like domain (InterPro:IPR011992)%2C Calcium-binding EF-hand (InterPro:IPR002048)%2C EF-hand (InterPro:IPR018248)%3B BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1)%3B Has 23710 Blast hits to 16970 proteins in 1546 species: Archae - 3%3B Bacteria - 191%3B Metazoa - 9601%3B Fungi - 5599%3B Plants - 4898%3B Viruses - 2%3B Other Eukaryotes - 3416 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB02g07465 ChrB02 - View
Brassica carinata BcaC07g40473 ChrC07 + View
Brassica napus A09p51720 A09 + View
Brassica napus A08p36210 A08 - View
Brassica napus C08p34450 C08 + View
Brassica napus C04p70330 C04 - View
Brassica napus C03p28780 C03 - View
Brassica napus C08p02310 C08 + View
Brassica oleracea BolC8t47024H C8 + View
Brassica oleracea BolC3t15238H C3 - View
Brassica oleracea BolC8t51046H C8 + View
Brassica rapa BraA09t40608Z A09 + View
Cicer arietinum L. Ca_01258_v3 Ca_LG1_v3 + View
Citrus clementina Ciclev10022299m.g scaffold_3 - View
Cardamine hirsuta CARHR169840 Calmodulin-like protein Chr5 + View
Cardamine hirsuta CARHR005510 Calmodulin-like protein Chr1 + View
Capsella rubella Carub.0001s0534 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED scaffold_1 + View
Capsella rubella Carub.0005s2618 PTHR10891//PTHR10891:SF578 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 4-RELATED scaffold_5 + View
Durio zibethinus Duzib151G1013 NW_019167904.1 - View
Durio zibethinus Duzib268G1408 NW_019168270.1 - View
Durio zibethinus Duzib212G0491 NW_019168026.1 - View
Eutrema salsugineum Thhalv10009546m.g PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED scaffold_5 - View
Eutrema salsugineum Thhalv10006367m.g PTHR10891:SF578 - CALMODULIN-LIKE PROTEIN 4-RELATED scaffold_19 - View
Gossypium hirsutum Gohir.D09G204500 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 D09 + View
Gossypium hirsutum Gohir.A09G211050 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 A09 + View
Gossypium hirsutum Gohir.A02G012700 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 A02 - View
Gossypium hirsutum Gohir.A10G138000 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED A10 + View
Gossypium hirsutum Gohir.D02G013400 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 D02 - View
Gossypium hirsutum Gohir.D10G128800 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED D10 - View
Glycine max Glyma.12G052100 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Gm12 - View
Glycine max Glyma.11G127500 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Gm11 - View
Glycine max Glyma.13G344200 PTHR10891//PTHR10891:SF578 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 4-RELATED Gm13 - View
Gossypium raimondii Gorai.006G228400 Chr06 + View
Gossypium raimondii Gorai.005G016900 Chr05 - View
Gossypium raimondii Gorai.011G142200 Chr11 - View
Lupinus albus Lalb_Chr22g0352151 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Lalb_Chr22 + View
Lotus japonicus Lj3g0028251 PTHR10891//PTHR10891:SF586 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 6-RELATED chr3 - View
Malus domestica MD04G1041400 Calcium-binding EF-hand family protein Chr04 + View
Manihot esculenta Manes.04G042900 Chromosome04 - View
Medicago truncatula Medtr2g098890 EF hand calcium-binding family protein chr2 - View
Olea europaea Oeu034458.1 scaffold290 - View
Oryza sativa ssp. japonica Os04g0492800 Similar to H0425E08.6 protein. chr04 + View
Prunus persica Prupe.1G194800 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Pp01 + View
Populus trichocarpa Potri.017G029700 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 Chr17 - View
Populus trichocarpa Potri.007G128600 PTHR10891//PTHR10891:SF642 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // CALMODULIN-LIKE PROTEIN 3 Chr07 + View
Phaseolus vulgaris Phvul.005G152900 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Chr05 - View
Phaseolus vulgaris Phvul.011G054100 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED Chr11 - View
Quercus lobata QL10p049466 10 - View
Rhododendron simsii Rhsim02G0077300 chr02 + View
Salvia bowleyana SalBow3G3880 GWHASIU00000006 + View
Salix brachista Sabra07G0105100 GWHAAZH00000007 + View
Schrenkiella parvula Sp5g03700 PTHR10891:SF578 - CALMODULIN-LIKE PROTEIN 4-RELATED ch5-1 - View
Schrenkiella parvula Sp1g04810 PTHR10891:SF586 - CALMODULIN-LIKE PROTEIN 6-RELATED ch1-1 + View
Trochodendron aralioides TAR636G0693 group1 - View
Theobroma cacao Thecc.04G179100 Calcium-binding EF-hand family protein Chromosome_4 - View
Tarenaya hassleriana THA.LOC104803744 calmodulin-like protein 4 NW_010960188.1 + View
Tarenaya hassleriana THA.LOC104800895 calmodulin-like protein 7 isoform X1 NW_010969548.1 - View
Trifolium pratense TPR.G34210 Tp57577_TGAC_v2_LG3 - View
Tripterygium wilfordii TWI63G1094 NC_052240.1 + View
Vigna mungo VMungo1127G0592 CM024076.1 - View
Vigna mungo VMungo1080G0313 CM024079.1 + View