Gene: AT3G59440
General Information
Structural Information
- Species Arabidopsis thaliana
- Gene Identifier AT3G59440
- Transcript Identifier AT3G59440.1
- Gene Type Coding gene
- Location Chr3 : 21970423-21971010 : positive
Gene Family Information
- ID HOM05D000135
- #Genes/#Species 2640/99
- Phylogenetic origin
- ID ORTHO05D013206
- #Genes/#Species 18/10
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid AT3G59440.1
- uniprot Q9LX27
Descriptions
- Description Calcium-binding EF-hand family protein
- Computational description Calcium-binding EF-hand family protein; FUNCTIONS IN: calcium ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 23710 Blast hits to 16970 proteins in 1546 species: Archae - 3; Bacteria - 191; Metazoa - 9601; Fungi - 5599; Plants - 4898; Viruses - 2; Other Eukaryotes - 3416 (source: NCBI BLink).
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008150 | ND | Gene Ontology | biological_process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005509 | IEA | GOA Database | calcium ion binding | |
| GO:0005509 | IBA | Gene Ontology | calcium ion binding | 1 |
| GO:0005509 | IEA | InterPro | calcium ion binding | |
| GO:0046872 | IEA | GOA Database | metal ion binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | ISM | Gene Ontology | extracellular region | |
| GO:0012505 | IDA | Gene Ontology | endomembrane system | 2 |
| GO:0031303 | IDA | Gene Ontology | integral component of endosome membrane | 2 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.7.2 | Multi-process regulation.calcium-dependent signalling.calcium sensor (CML) |