Gene: AT1G05990

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G05990
  • Transcript Identifier AT1G05990.1
  • Gene Type Coding gene
  • Location Chr1 : 1818588-1819040 : positive

Gene Family Information

  • ID HOM05D000135
  • #Genes/#Species 2640/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G05990.1
  • Alias RHS1,ROOT HAIR SPECIFIC 1
  • uniprot Q9LNE7

Descriptions

  • Description EF hand calcium-binding protein family
  • Computational description EF hand calcium-binding protein family; FUNCTIONS IN: calcium ion binding; LOCATED IN: cellular_component unknown; EXPRESSED IN: root hair; CONTAINS InterPro DOMAIN/s: Parvalbumin (InterPro:IPR008080), EF-Hand 1, calcium-binding site (InterPro:IPR018247), EF-HAND 2 (InterPro:IPR018249), EF-hand-like domain (InterPro:IPR011992), Calcium-binding EF-hand (InterPro:IPR002048), EF-hand (InterPro:IPR018248); BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT2G43290.1); Has 27146 Blast hits to 18777 proteins in 1639 species: Archae - 2; Bacteria - 228; Metazoa - 11784; Fungi - 5059; Plants - 5970; Viruses - 0; Other Eukaryotes - 4103 (source: NCBI BLink).
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005509
IEA
GOA Databasecalcium ion binding
GO:0005509
IBA
Gene Ontologycalcium ion binding1
GO:0005509
IEA
InterProcalcium ion binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002048 EF-hand domain
IPR011992 EF-hand domain pair
Mapman id Description
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)