Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG3G8300 LG-3 - View
Aethionema arabicum Aa31LG1G27120 LG-1 + View
Acer truncatum Atru.chr5.366 chr5 + View
Actinidia chinensis Actinidia09577 Lachesis_group15 + View
Actinidia chinensis Actinidia31449 Lachesis_group0 + View
Arabidopsis lyrata AL4G44820 scaffold_4 + View
Arabidopsis lyrata AL5G43360 scaffold_5 - View
Avicennia marina MSTRG.17220 ScioBoG_19743_HRSCAF_19834 + View
Avicennia marina MSTRG.8779 ScioBoG_11560_HRSCAF_11609 + View
Avicennia marina MSTRG.4879 ScioBoG_102838_HRSCAF_103081 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.509QUQ PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.15 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.QJDQ9C PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 arahy.Tifrunner.gnm1.Arahy.09 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.6TKF7G PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED arahy.Tifrunner.gnm1.Arahy.02 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.679QY2 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.14 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.P3T58Z PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED arahy.Tifrunner.gnm1.Arahy.04 - View
Arabidopsis thaliana AT2G45650 AGAMOUS-like 6 Sequence suggests this encodes a MADS-box transcription factor. Negatively regulates the FLC/MAF clade genes and positively regulates FT in Arabidopsis. AGAMOUS-like 6 (AGL6)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: vegetative to reproductive phase transition of meristem%2C floral organ development%3B LOCATED IN: nucleus%3B EXPRESSED IN: 8 plant structures%3B EXPRESSED DURING: C globular stage%2C F mature embryo stage%2C petal differentiation and expansion stage%2C E expanded cotyledon stage%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 13 (TAIR:AT3G61120.1)%3B Has 7294 Blast hits to 7293 proteins in 914 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 630%3B Fungi - 307%3B Plants - 6281%3B Viruses - 0%3B Other Eukaryotes - 76 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G61120 AGAMOUS-like 13 AGAMOUS-like 13 (AGL13)%3B FUNCTIONS IN: DNA binding%2C sequence-specific DNA binding transcription factor activity%3B INVOLVED IN: regulation of transcription%2C DNA-dependent%3B LOCATED IN: nucleus%3B EXPRESSED IN: 14 plant structures%3B EXPRESSED DURING: 9 growth stages%3B CONTAINS InterPro DOMAIN/s: Transcription factor%2C MADS-box (InterPro:IPR002100)%2C Transcription factor%2C K-box (InterPro:IPR002487)%3B BEST Arabidopsis thaliana protein match is: AGAMOUS-like 6 (TAIR:AT2G45650.1)%3B Has 7229 Blast hits to 7228 proteins in 913 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 632%3B Fungi - 307%3B Plants - 6214%3B Viruses - 0%3B Other Eukaryotes - 76 (source: NCBI BLink). Chr3 - View
Brassica carinata BcaNung03693 Contig1271 - View
Brassica carinata BcaC02g10204 ChrC02 - View
Brassica carinata BcaC01g05117 ChrC01 + View
Brassica carinata BcaC02g12194 ChrC02 + View
Brassica napus A03p15990 A03 + View
Brassica napus A05p05610 A05 + View
Brassica napus A03p25270 A03 + View
Brassica napus C04p06560 C04 + View
Brassica napus A01p16710 A01 - View
Brassica napus C03p30140 C03 + View
Brassica napus A10p09690 A10 - View
Brassica oleracea BolC4t28674H C4 - View
Brassica oleracea BolC4t22281H C4 - View
Brassica oleracea BolC1t02025H C1 - View
Brassica oleracea BolC3t15362H C3 + View
Brassica rapa BraA05t19534Z A05 + View
Brassica rapa BraA03t11728Z A03 + View
Brassica rapa BraA10t43050Z A10 - View
Beta vulgaris EL10Ac1g00949 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0000825 hypothetical protein PHAVU_010G088100g [Phaseolus vulgaris] Chr3 + View
Cannabis sativa CANSAT56G0334 NC_044371.1 + View
Cicer arietinum L. Ca_07844_v3 Ca_LG3_v3 + View
Coffea canephora Cc02_g36980 MADS-box transcription factor 6 chr2 + View
Citrus clementina Ciclev10022568m.g scaffold_3 + View
Cardamine hirsuta CARHR140870 MADS-box transcription factor Chr4 + View
Carya illinoinensis CiPaw.01G258100 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr01 + View
Carya illinoinensis CiPaw.02G164800 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr02 + View
Citrullus lanatus ClCG06G000220 MADS-box transcription factor CG_Chr06 + View
Cucumis melo MELO3C006159.2 MADS-box protein chr06 + View
Cucumis melo MELO3C022515.2 MADS-box protein SOC1-like chr11 + View
Carica papaya Cpa.g.sc18.166 supercontig_18 - View
Chenopodium quinoa AUR62004272 AGL6: Agamous-like MADS-box protein AGL6 C_Quinoa_Scaffold_4250 + View
Capsella rubella Carub.0004s2830 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED scaffold_4 + View
Capsella rubella Carub.0007s1557 PTHR11945//PTHR11945:SF204 - MADS BOX PROTEIN // F21D18.12-RELATED scaffold_7 + View
Cucumis sativus L. CsaV3_3G009400 MADS-box protein chr3 + View
Daucus carota DCAR_008577 hypothetical protein DCARv2_Chr2 + View
Daucus carota DCAR_006890 hypothetical protein DCARv2_Chr2 - View
Davidia involucrata Dinv43739 GWHABJS00000016 + View
Davidia involucrata Dinv35141 GWHABJS00000009 + View
Durio zibethinus Duzib133G1353 NW_019167938.1 + View
Durio zibethinus Duzib068G0408 NW_019167838.1 + View
Durio zibethinus Duzib138G0083 NW_019167893.1 + View
Durio zibethinus Duzib268G0181 NW_019168270.1 + View
Erigeron canadensis ECA232G1657 Conyza_canadensis_scaffold:2 - View
Eucalyptus grandis Eucgr.D02425 Chr04 + View
Eucalyptus grandis Eucgr.E01330 Chr05 - View
Erythranthe guttata Migut.B01667 scaffold_2 + View
Eutrema salsugineum Thhalv10006419m.g PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED scaffold_19 + View
Eutrema salsugineum Thhalv10026205m.g PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 scaffold_1 + View
Eutrema salsugineum Thhalv10027162m.g PTHR11945:SF191 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL14-RELATED scaffold_1 + View
Eutrema salsugineum Thhalv10001597m.g PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED scaffold_22 + View
Fragaria x ananassa FAN03G1661 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Fvb7-3 + View
Gossypium hirsutum Gohir.A11G083600 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED A11 + View
Gossypium hirsutum Gohir.A08G128600 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED A08 + View
Gossypium hirsutum Gohir.D07G150300 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED D07 + View
Gossypium hirsutum Gohir.D08G149900 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED D08 + View
Gossypium hirsutum Gohir.A07G144400 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED A07 + View
Gossypium hirsutum Gohir.D11G087700 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED D11 + View
Glycine max Glyma.09G266200 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Gm09 + View
Glycine max Glyma.03G019300 PTHR11945:SF208 - MADS-BOX PROTEIN SOC1 Gm03 + View
Gossypium raimondii Gorai.007G093700 Chr07 + View
Gossypium raimondii Gorai.004G155700 Chr04 + View
Gossypium raimondii Gorai.001G172200 Chr01 + View
Hydrangea macrophylla Hma1.2p1_0033F.1_g020760 Hma1.2p1_0033F.1 + View
Lupinus albus Lalb_Chr19g0131171 PF00319 - SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF) Lalb_Chr19 - View
Lupinus albus Lalb_Chr10g0097631 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr10 + View
Lupinus albus Lalb_Chr06g0160871 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr06 + View
Lupinus albus Lalb_Chr17g0340061 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr17 + View
Lotus japonicus Lj3g0002886 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr3 + View
Lotus japonicus Lj5g0014542 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED chr5 + View
Lonicera japonica Lj9A574G31 GWHAAZE00000009 - View
Lactuca sativa Lsat_1_v5_gn_3_134681 Lsat_1_v8_lg_3 + View
Malus domestica MD02G1197400 AGAMOUS-like 20 Chr02 + View
Manihot esculenta Manes.05G041900 Chromosome05 + View
Manihot esculenta Manes.14G030800 Chromosome14 + View
Medicago truncatula Medtr7g075850 MADS-box transcription factor chr7 + View
Punica granatum PGR142G3692 NC_045128.1 + View
Punica granatum PGR042G1101 NC_045130.1 + View
Prunus persica Prupe.2G151000 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Pp02 + View
Populus trichocarpa Potri.002G151700 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr02 - View
Populus trichocarpa Potri.012G132600 PTHR11945//PTHR11945:SF206 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr12 + View
Populus trichocarpa Potri.014G074100 PTHR11945:SF146 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED Chr14 + View
Phaseolus vulgaris Phvul.008G073800 PTHR11945//PTHR11945:SF222 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr08 + View
Phaseolus vulgaris Phvul.007G065100 PTHR11945//PTHR11945:SF165 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Chr07 + View
Quercus lobata QL08p051133 8 + View
Rhododendron simsii Rhsim01G0160500 chr01 + View
Rhododendron simsii Rhsim07G0023100 chr07 + View
Salvia bowleyana SalBow5G5167 GWHASIU00000003 + View
Salix brachista Sabra14G0052900 GWHAAZH00000014 - View
Salix brachista Sabra02G0119900 GWHAAZH00000002 - View
Simmondsia chinensis Sc02g0002300 GWHAASQ00000002 + View
Sechium edule Sed0009092 LG09 + View
Sechium edule Sed0019435 LG12 + View
Sechium edule Sed0021213 LG04 - View
Sechium edule Sed0009751 LG02 + View
Solanum lycopersicum Solyc01g092950.3 MADS-box protein (AHRD V3.3 *** A1BQ41_VITVI) SL4.0ch01 + View
Solanum lycopersicum Solyc06g150109.1 MADS-box transcription factor (AHRD V3.3 *** Q1EMR8_PLAMJ) SL4.0ch06 - View
Schrenkiella parvula Sp4g27690 PTHR11945//PTHR11945:SF146 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED ch4-6 + View
Schrenkiella parvula Sp7g23460 PTHR11945//PTHR11945:SF208 - MADS BOX PROTEIN // MADS-BOX PROTEIN SOC1 ch7-4 - View
Schrenkiella parvula Sp5g02260 PTHR11945//PTHR11945:SF146 - MADS BOX PROTEIN // AGAMOUS-LIKE MADS-BOX PROTEIN AGL13-RELATED ch5-1 + View
Solanum pennellii Sopen01g037750 hypothetical protein Spenn-ch01 + View
Solanum tuberosum PGSC0003DMG400000008 Transcription factor ST4.03ch01 + View
Selenicereus undatus Hund27334 Scaffold_2055 + View
Trochodendron aralioides TAR636G2894 group1 + View
Theobroma cacao Thecc.01G371300 AGAMOUS-like 20 Chromosome_1 + View
Tarenaya hassleriana THA.LOC104825084 MADS-box protein AGL72-like NW_010966986.1 - View
Tarenaya hassleriana THA.LOC104817266 MADS-box protein SOC1-like isoform X1 NW_010965946.1 - View
Tripterygium wilfordii TWI39G0186 NC_052250.1 + View
Tripterygium wilfordii TWI59G0565 NC_052248.1 + View
Tripterygium wilfordii TWI14G1188 NC_052249.1 - View
Tripterygium wilfordii TWI23G0478 NC_052239.1 - View
Vaccinium macrocarpon vmacro13355 Similar to MADS3: Agamous-like MADS-box protein MADS3 (Vitis vinifera OX%3D29760) chr7_Vaccinium_macrocarpon_Stevens_v1 + View
Vaccinium macrocarpon vmacro06739 Similar to AGL42: MADS-box protein AGL42 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 + View
Vitis vinifera GSVIVG01027579001 chr15 + View