Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG4G6220 LG-4 - View
Aethionema arabicum Aa31LG7G4700 LG-7 - View
Acer truncatum Atru.chr13.210 chr13 + View
Actinidia chinensis Actinidia37957 Lachesis_group7 - View
Arabidopsis lyrata AL1G33170 scaffold_1 - View
Arabidopsis lyrata AL2G36140 scaffold_2 - View
Aquilegia oxysepala Aqoxy6G01936 CHR06 + View
Arabidopsis thaliana AT1G20340 Cupredoxin superfamily protein recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form%2C expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. Mutation of this gene does not have obvious effect on photosynthesis. In plsp1-1 mutant plastids%2C the nonmature form of the protein localizes in the membrane. DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112)%3B FUNCTIONS IN: electron carrier activity%2C copper ion binding%3B INVOLVED IN: response to UV%2C response to chemical stimulus%2C copper ion homeostasis%2C negative regulation of translation%2C response to copper ion%3B LOCATED IN: thylakoid%2C thylakoid lumen%2C chloroplast thylakoid lumen%2C chloroplast stroma%2C chloroplast%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235)%2C Cupredoxin (InterPro:IPR008972)%2C Plastocyanin (InterPro:IPR002387)%2C Blue (type 1) copper domain (InterPro:IPR000923)%3B BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1)%3B Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146%3B Bacteria - 416%3B Metazoa - 0%3B Fungi - 2%3B Plants - 206%3B Viruses - 5%3B Other Eukaryotes - 511 (source: NCBI BLink). Chr1 - View
Arabidopsis thaliana AT1G76100 plastocyanin 1 One of two Arabidopsis plastocyanin genes. Expressed at 1/10th level of PETE2. Does not respond to increased copper levels and is thought to be the isoform that participates in electron transport under copper-limiting conditions. Mutation of this gene does not have obvious effect on photosynthesis. plastocyanin 1 (PETE1)%3B FUNCTIONS IN: electron carrier activity%2C copper ion binding%3B LOCATED IN: thylakoid%2C thylakoid lumen%2C chloroplast thylakoid lumen%2C chloroplast%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235)%2C Cupredoxin (InterPro:IPR008972)%2C Plastocyanin (InterPro:IPR002387)%2C Blue (type 1) copper domain (InterPro:IPR000923)%3B BEST Arabidopsis thaliana protein match is: Cupredoxin superfamily protein (TAIR:AT1G20340.1)%3B Has 1305 Blast hits to 1299 proteins in 244 species: Archae - 140%3B Bacteria - 448%3B Metazoa - 0%3B Fungi - 0%3B Plants - 204%3B Viruses - 5%3B Other Eukaryotes - 508 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0661G060 AmTr_v1.0_scaffold00001 + View
Brassica carinata BcaC05g25945 ChrC05 - View
Brassica carinata BcaC08g47292 ChrC08 + View
Brassica carinata BcaB07g32038 ChrB07 - View
Brassica carinata BcaC08g47103 ChrC08 - View
Brassica napus C07p23120 C07 + View
Brassica napus A06p16430 A06 - View
Brassica napus A07p15730 A07 + View
Brassica napus A07p41660 A07 - View
Brassica napus C06p50040 C06 - View
Brassica napus C08p20070 C08 - View
Brassica napus C05p18970 C05 - View
Brassica oleracea BolC5t30597H C5 - View
Brassica oleracea BolC6t40043H C6 - View
Brassica oleracea BolC7t42849H C7 + View
Brassica rapa BraA07t29309Z A07 + View
Brassica rapa BraA06t24747Z A06 - View
Brassica rapa BraA07t31695Z A07 - View
Beta vulgaris EL10Ac1g02063 K02638 - plastocyanin (petE) Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0046333 Plastocyanin A, chloroplast precursor, putative [Ricinus communis] Chr4 - View
Capsicum annuum CAN.G311.79 PGAv.1.6.scaffold311 - View
Cannabis sativa CANSAT25G3567 NC_044370.1 + View
Cicer arietinum L. Ca_15453_v3 Ca_LG5_v3 + View
Corylus avellana Haze_22717 Similar to PETE: Plastocyanin, chloroplastic (Pisum sativum OX%3D3888) 3 - View
Coffea canephora Cc10_g01080 Plastocyanin, chloroplastic chr10 + View
Citrus clementina Ciclev10002698m.g scaffold_5 - View
Ceratophyllum demersum CDE02G3101 1 - View
Carpinus fangiana Cfa014015 Cfa05 - View
Cardamine hirsuta CARHR069640 plastocyanin 1 Chr2 - View
Cardamine hirsuta CARHR020810 plastocyanin 1 Chr1 - View
Carya illinoinensis CiPaw.08G069600 K02638 - plastocyanin (petE) Chr08 - View
Carya illinoinensis CiPaw.07G143100 PTHR34192:SF2 - PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED Chr07 + View
Citrullus lanatus ClCG05G015390 Plastocyanin family protein CG_Chr05 + View
Cucumis melo MELO3C003725.2 plastocyanin chr04 + View
Corchorus olitorius COL.COLO4_26078 hypothetical protein AWUE01019205.1 + View
Carica papaya Cpa.g.sc26.256 supercontig_26 + View
Chenopodium quinoa AUR62013862 PETE: Plastocyanin, chloroplastic C_Quinoa_Scaffold_1412 + View
Chenopodium quinoa AUR62036731 PETE: Plastocyanin, chloroplastic C_Quinoa_Scaffold_3541 - View
Capsella rubella Carub.0001s1985 K02638 - plastocyanin (petE) scaffold_1 - View
Cucumis sativus L. CsaV3_3G046150 Plastocyanin chr3 - View
Daucus carota DCAR_013894 hypothetical protein DCARv2_Chr4 - View
Davidia involucrata Dinv39560 GWHABJS00000011 - View
Davidia involucrata Dinv31897 GWHABJS00000002 - View
Durio zibethinus Duzib116G0390 NW_019167949.1 + View
Erigeron canadensis ECA233G0125 Conyza_canadensis_scaffold:1 + View
Erythranthe guttata Migut.C00904 scaffold_3 - View
Erythranthe guttata Migut.N03188 scaffold_14 - View
Eutrema salsugineum Thhalv10019237m.g K02638 - plastocyanin (petE) scaffold_9 + View
Eutrema salsugineum Thhalv10008749m.g K02638 - plastocyanin (petE) scaffold_5 + View
Fragaria x ananassa FAN15G0804 K02638 - plastocyanin (petE) Fvb2-4 - View
Fragaria x ananassa FAN27G2657 K02638 - plastocyanin (petE) Fvb2-1 + View
Fragaria x ananassa FAN20G0823 K02638 - plastocyanin (petE) Fvb2-3 - View
Fragaria vesca FvH4_2g37890 K02638 - plastocyanin (petE) Fvb2 + View
Gossypium hirsutum Gohir.D05G185400 K02638 - plastocyanin (petE) D05 + View
Gossypium hirsutum Gohir.A05G182400 K02638 - plastocyanin (petE) A05 + View
Glycine max Glyma.06G020400 K02638 - plastocyanin (petE) Gm06 + View
Glycine max Glyma.04G020300 K02638 - plastocyanin (petE) Gm04 + View
Gossypium raimondii Gorai.009G190800 Chr09 + View
Hydrangea macrophylla Hma1.2p1_0023F.1_g015810 Hma1.2p1_0023F.1 - View
Hydrangea macrophylla Hma1.2p1_2322F.1_g319850 Hma1.2p1_2322F.1 - View
Lupinus albus Lalb_Chr19g0131621 K02638 - plastocyanin (petE) Lalb_Chr19 - View
Lupinus albus Lalb_Chr03g0033581 K02638 - plastocyanin (petE) Lalb_Chr03 - View
Lupinus albus Lalb_Chr01g0008481 K02638 - plastocyanin (petE) Lalb_Chr01 + View
Lotus japonicus Lj1g0015317 K02638 - plastocyanin (petE) chr1 + View
Lonicera japonica Lj4C16T12 GWHAAZE00000004 + View
Lonicera japonica Lj4P802T100 GWHAAZE00000004 - View
Lactuca sativa Lsat_1_v5_gn_0_680 K02638 - plastocyanin (petE) Lsat_1_v8_lg_0 - View
Lactuca sativa Lsat_1_v5_gn_8_28601 K02638 - plastocyanin (petE) Lsat_1_v8_lg_8 + View
Malus domestica MD08G1007200 plastocyanin 1 Chr08 + View
Malus domestica MD15G1006300 plastocyanin 1 Chr15 + View
Manihot esculenta Manes.05G142000 Chromosome05 + View
Medicago truncatula Medtr3g114850 plastocyanin chr3 - View
Nelumbo nucifera Nn6g31900 chr6 + View
Nicotiana tabacum Nitab4.5_0003030g0010 Plastocyanin, Cupredoxin, Blue (type 1) copper protein, Blue (type 1) copper domain Nitab4.5_0003030 + View
Nicotiana tabacum Nitab4.5_0002353g0080 Blue (type 1) copper domain, Cupredoxin, Blue (type 1) copper protein, Plastocyanin Nitab4.5_0002353 + View
Nicotiana tabacum Nitab4.5_0000498g0120 Cupredoxin, Plastocyanin, Blue (type 1) copper domain Nitab4.5_0000498 - View
Olea europaea Oeu051143.1 chr18 + View
Olea europaea Oeu021483.1 scaffold1937 + View
Petunia axillaris Peaxi162Scf00174g00103 plastocyanin 1 Peaxi162Scf00174 - View
Punica granatum PGR031G2466 NC_045127.1 + View
Prunus persica Prupe.1G358900 K02638 - plastocyanin (petE) Pp01 + View
Papaver somniferum PSO541G1800 NC_039363.1 - View
Populus trichocarpa Potri.002G016000 K02638 - plastocyanin (petE) Chr02 + View
Populus trichocarpa Potri.005G246100 K02638 - plastocyanin (petE) Chr05 - View
Phaseolus vulgaris Phvul.009G020300 K02638 - plastocyanin (petE) Chr09 - View
Quercus lobata QL02p013016 CM012294 - View
Rhododendron simsii Rhsim07G0251400 chr07 - View
Rhododendron simsii Rhsim06G0011800 chr06 + View
Striga asiatica SGA_v2.0_scaffold19G08591 scaffold19 + View
Salvia bowleyana SalBow6G1848 GWHASIU00000002 - View
Salix brachista Sabra05G0190200 GWHAAZH00000005 - View
Salix brachista Sabra02G0012900 GWHAAZH00000002 + View
Simmondsia chinensis Sc26g0004480 GWHAASQ00000026 - View
Simmondsia chinensis Sc02g0008920 GWHAASQ00000002 - View
Sechium edule Sed0002819 LG01 + View
Solanum lycopersicum Solyc04g082010.1 pre-plastocyanin SL4.0ch04 - View
Schrenkiella parvula Sp1g18060 K02638 - plastocyanin (petE) ch1-1 - View
Schrenkiella parvula Sp5g31220 K02638 - plastocyanin (petE) ch5-7 - View
Solanum pennellii Sopen04g035660 Plastocyanin - Solanum tuberosum (Potato), recombination and DNA-damage resistance protein (DRT112) One of two Arabidopsis plastocyanin genes. Predominant form, expressed 10x higher than PETE1. PETE2 is thought to be post-transcriptionally regulated via copper accumulation and is involved in copper homeostasis. | DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112) | FUNCTIONS IN: electron carrier activity, copper ion binding | INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion | LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast | EXPRESSED IN: 25 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein , Cupredoxin , Plastocyanin , Blue (type 1) copper domain | BEST Arabidopsis thaliana protein match is: plastocyanin 1 Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400041620 Plastocyanin, chloroplastic ST4.03ch04 - View
Trochodendron aralioides TAR625G1162 group4 + View
Trochodendron aralioides TAR381G1019 group11 + View
Trochodendron aralioides TAR628G0544 group5 - View
Theobroma cacao Thecc.08G052400 Plastocyanin 1 Chromosome_8 - View
Tarenaya hassleriana THA.LOC104813771 plastocyanin NW_010965373.1 + View
Trifolium pratense TPR.G38114 Tp57577_TGAC_v2_LG7 - View
Tripterygium wilfordii TWI56G0334 NC_052242.1 - View
Tripterygium wilfordii TWI12G1003 NC_052243.1 + View
Vigna mungo VMungo1309G1934 CM024072.1 - View
Vitis vinifera GSVIVG01008733001 chr18 + View