Gene: AT1G20340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G20340
  • Transcript Identifier AT1G20340.1
  • Gene Type Coding gene
  • Location Chr1 : 7042770-7043273 : negative

Gene Family Information

  • ID HOM05D004247
  • #Genes/#Species 167/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G20340.1
  • symbol DRT112
  • Alias PETE2,PLASTOCYANIN 2
  • full_name DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112
  • uniprot P42699

Descriptions

  • Description Cupredoxin superfamily protein
  • Computational description DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112 (DRT112); FUNCTIONS IN: electron carrier activity, copper ion binding; INVOLVED IN: response to UV, response to chemical stimulus, copper ion homeostasis, negative regulation of translation, response to copper ion; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Blue (type 1) copper protein (InterPro:IPR001235), Cupredoxin (InterPro:IPR008972), Plastocyanin (InterPro:IPR002387), Blue (type 1) copper domain (InterPro:IPR000923); BEST Arabidopsis thaliana protein match is: plastocyanin 1 (TAIR:AT1G76100.1); Has 1286 Blast hits to 1278 proteins in 235 species: Archae - 146; Bacteria - 416; Metazoa - 0; Fungi - 2; Plants - 206; Viruses - 5; Other Eukaryotes - 511 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0022900
IEA
GOA Databaseelectron transport chain
GO:0009411
IGI
Gene Ontologyresponse to UV1
GO:0017148
IMP
Gene Ontologynegative regulation of translation2
GO:0055070
IMP
Gene Ontologycopper ion homeostasis3
GO:0046688
IEP
Gene Ontologyresponse to copper ion3

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019904
IPI
GOA Databaseprotein domain specific binding
GO:0009055
IEA
GOA Databaseelectron transfer activity
GO:0009055
IEA
InterProelectron transfer activity
GO:0005507
IEA
Gene Ontologycopper ion binding
GO:0005507
IEA
InterProcopper ion binding
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046028
IGI
Gene Ontologyelectron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009579
IDA
IEA
GOA Databasethylakoid
GO:0009579
HDA
Gene Ontologythylakoid5
GO:0016020
IEA
GOA Databasemembrane
GO:0009507
IDA
IEA
GOA Databasechloroplast
GO:0009507
HDA
ISM
Gene Ontologychloroplast6
GO:0009536
IEA
GOA Databaseplastid
GO:0009534
IDA
GOA Databasechloroplast thylakoid
GO:0009534
HDA
Gene Ontologychloroplast thylakoid7
GO:0031977
IDA
GOA Databasethylakoid lumen
GO:0031977
HDA
Gene Ontologythylakoid lumen8
GO:0009570
IDA
GOA Databasechloroplast stroma
GO:0009570
HDA
Gene Ontologychloroplast stroma9
GO:0009535
IEA
GOA Databasechloroplast thylakoid membrane
GO:0005634
HDA
Gene Ontologynucleus10
GO:0055035
IDA
Gene Ontologyplastid thylakoid membrane11
GO:0009543
HDA
Gene Ontologychloroplast thylakoid lumen8

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR008972 Cupredoxin
IPR002387 Plastocyanin
IPR000923 Blue (type 1) copper domain
IPR001235 Blue (type 1) copper protein, plastocyanin-type
Mapman id Description
1.1.3.1 Photosynthesis.photophosphorylation.Cytb6/f to PS-I electron carriers.plastocyanin copper-protein (PetE)