Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Prupe.1G416300 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Pp01 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G21470 LG-2 + View
Acer truncatum Atru.chr7.1513 chr7 - View
Actinidia chinensis Actinidia29894 Lachesis_group25 + View
Actinidia chinensis Actinidia39753 Lachesis_group5 - View
Actinidia chinensis Actinidia25284 Lachesis_group18 - View
Arabidopsis lyrata AL7G23280 scaffold_7 - View
Avicennia marina MSTRG.26400 ScioBoG_52287_HRSCAF_52434 - View
Avicennia marina MSTRG.6034 ScioBoG_102839_HRSCAF_103093 - View
Avicennia marina MSTRG.11676 ScioBoG_17730_HRSCAF_17811 + View
Aquilegia oxysepala Aqoxy7G03947 CHR07 + View
Aquilegia oxysepala Aqoxy7G01348 CHR07 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.76L77D PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED arahy.Tifrunner.gnm1.Arahy.03 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.JHS34B K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) arahy.Tifrunner.gnm1.Arahy.05 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.U9GDAA K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) arahy.Tifrunner.gnm1.Arahy.15 - View
Arabidopsis thaliana AT4G29160 SNF7 family protein SNF7.1%3B CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024)%3B BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT2G19830.1)%3B Has 1847 Blast hits to 1847 proteins in 245 species: Archae - 2%3B Bacteria - 29%3B Metazoa - 703%3B Fungi - 444%3B Plants - 428%3B Viruses - 0%3B Other Eukaryotes - 241 (source: NCBI BLink). Chr4 + View
Arabidopsis thaliana AT2G19830 SNF7 family protein SNF7.2%3B INVOLVED IN: vesicle-mediated transport%3B LOCATED IN: ESCRT III complex%2C plasma membrane%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Snf7 (InterPro:IPR005024)%3B BEST Arabidopsis thaliana protein match is: SNF7 family protein (TAIR:AT4G29160.3)%3B Has 1789 Blast hits to 1789 proteins in 248 species: Archae - 16%3B Bacteria - 15%3B Metazoa - 681%3B Fungi - 406%3B Plants - 433%3B Viruses - 0%3B Other Eukaryotes - 238 (source: NCBI BLink). Chr2 - View
Amborella trichopoda ATR0057G133 AmTr_v1.0_scaffold00111 - View
Amborella trichopoda ATR0705G112 AmTr_v1.0_scaffold00056 + View
Brassica carinata BcaNung00457 Contig281 - View
Brassica carinata BcaNung01329 Contig488 - View
Brassica carinata BcaC09g51705 ChrC09 + View
Brassica napus A03p58750 A03 + View
Brassica napus A01p08850 A01 - View
Brassica rapa BraA07t27889Z A07 + View
Brassica rapa BraA03t14938Z A03 + View
Brassica rapa BraA01t00832Z A01 - View
Camellia sinensis var. sinensis CSS0015579 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] Chr6 - View
Camellia sinensis var. sinensis CSS0012778 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] Chr14 - View
Camellia sinensis var. sinensis CSS0037724 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] Chr14 + View
Camellia sinensis var. sinensis CSS0029833 PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Cucumis melo] Chr12 - View
Capsicum annuum CAN.G1241.7 PGAv.1.6.scaffold1241 - View
Cicer arietinum L. Ca_17384_v3 Ca_LG6_v3 + View
Cicer arietinum L. Ca_25609_v3 Ca_LG8_v3 - View
Corylus avellana Haze_25861 Similar to VPS32.2: Vacuolar protein sorting-associated protein 32 homolog 2 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc06_g10890 Vacuolar protein sorting-associated protein 32 homolog 2 chr6 - View
Citrus clementina Ciclev10009534m.g scaffold_1 - View
Cardamine hirsuta CARHR236890 Charged multivesicular body protein 4b, putative Chr7 + View
Cardamine hirsuta CARHR110280 Charged multivesicular body protein 4b, putative Chr3 - View
Carya illinoinensis CiPaw.04G153600 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Chr04 + View
Carya illinoinensis CiPaw.15G042900 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Chr15 + View
Carya illinoinensis CiPaw.03G220400 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Chr03 + View
Citrullus lanatus ClCG03G015920 Charged multivesicular body protein 4b, putative CG_Chr03 - View
Citrullus lanatus ClCG11G001910 Charged multivesicular body protein 4b, putative CG_Chr11 - View
Cucumis melo MELO3C004611.2 vacuolar protein sorting-associated protein 32 homolog 2 chr05 + View
Corchorus olitorius COL.COLO4_18259 Snf7 AWUE01016437.1 + View
Capsella rubella Carub.0003s3410 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) scaffold_3 - View
Capsella rubella Carub.0007s1143 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) scaffold_7 - View
Cucumis sativus L. CsaV3_1G040030 vacuolar protein sorting-associated protein 32 homolog 2 chr1 + View
Cucumis sativus L. CsaV3_2G001640 vacuolar protein sorting-associated protein 32 homolog 2 chr2 - View
Daucus carota DCAR_012013 hypothetical protein DCARv2_Chr3 + View
Daucus carota DCAR_004453 hypothetical protein DCARv2_Chr1 + View
Davidia involucrata Dinv23413 GWHABJS00000017 + View
Davidia involucrata Dinv42282 GWHABJS00000013 - View
Davidia involucrata Dinv27953 GWHABJS00000003 + View
Davidia involucrata Dinv36725 GWHABJS00000001 - View
Durio zibethinus Duzib168G2081 NW_019168159.1 + View
Durio zibethinus Duzib150G0349 NW_019167882.1 + View
Durio zibethinus Duzib187G0995 NW_019167860.1 - View
Erigeron canadensis ECA233G4477 Conyza_canadensis_scaffold:1 + View
Eucalyptus grandis Eucgr.C00934 Chr03 + View
Eucalyptus grandis Eucgr.C02996 Chr03 - View
Erythranthe guttata Migut.J01070 scaffold_10 + View
Erythranthe guttata Migut.A00163 scaffold_1 + View
Erythranthe guttata Migut.K00569 scaffold_11 - View
Eutrema salsugineum Thhalv10026202m.g scaffold_1 - View
Eutrema salsugineum Thhalv10002096m.g K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) scaffold_12 - View
Fragaria x ananassa FAN26G3035 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb1-2 + View
Fragaria x ananassa FAN23G2685 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb1-3 - View
Fragaria x ananassa FAN19G1466 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb1-4 - View
Fragaria x ananassa FAN28G2640 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb1-1 + View
Fragaria x ananassa FAN26G0969 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb1-2 + View
Fragaria x ananassa FAN24G1983 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb2-2 - View
Fragaria vesca FvH4_2g32330 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb2 + View
Fragaria vesca FvH4_1g06720 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Fvb1 - View
Gossypium hirsutum Gohir.D06G068600 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) D06 - View
Gossypium hirsutum Gohir.D05G029300 PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED D05 - View
Gossypium hirsutum Gohir.A08G244300 PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED A08 - View
Gossypium hirsutum Gohir.A05G027400 PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED A05 - View
Gossypium hirsutum Gohir.A13G194300 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) A13 + View
Gossypium hirsutum Gohir.A06G070000 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) A06 - View
Gossypium hirsutum Gohir.D07G010000 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) D07 - View
Gossypium hirsutum Gohir.D13G200100 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) D13 + View
Gossypium hirsutum Gohir.A07G009700 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) A07 - View
Gossypium hirsutum Gohir.D08G265200 PTHR22761:SF8 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED D08 - View
Glycine max Glyma.07G127300 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Gm07 - View
Glycine max Glyma.05G224200 PTHR22761//PTHR22761:SF16//PTHR22761:SF8 - SNF7 - RELATED // SUBFAMILY NOT NAMED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED Gm05 + View
Glycine max Glyma.08G031200 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Gm08 + View
Glycine max Glyma.01G004500 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Gm01 + View
Gossypium raimondii Gorai.001G010300 Chr01 - View
Gossypium raimondii Gorai.010G080200 Chr10 - View
Gossypium raimondii Gorai.013G228900 Chr13 + View
Gossypium raimondii Gorai.009G029400 Chr09 - View
Gossypium raimondii Gorai.004G283100 Chr04 - View
Hydrangea macrophylla Hma1.2p1_0663F.1_g198620 Hma1.2p1_0663F.1 - View
Hydrangea macrophylla Hma1.2p1_1074F.1_g254440 Hma1.2p1_1074F.1 + View
Lupinus albus Lalb_Chr09g0331691 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Lalb_Chr09 - View
Lupinus albus Lalb_Chr05g0223491 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Lalb_Chr05 - View
Lupinus albus Lalb_Chr22g0349821 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Lalb_Chr22 + View
Lupinus albus Lalb_Chr14g0375271 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Lalb_Chr14 - View
Lotus japonicus Lj4g0009435 PTHR22761//PTHR22761:SF8 - SNF7 - RELATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 32 HOMOLOG 1-RELATED chr4 - View
Lonicera japonica Lj4A321T31 GWHAAZE00000004 - View
Lonicera japonica Lj7A670T60 GWHAAZE00000007 - View
Lonicera japonica Lj7A695T38 GWHAAZE00000007 + View
Lactuca sativa Lsat_1_v5_gn_6_7580 Lsat_1_v8_lg_6 - View
Magnolia biondii MBI04_g06986_MAGBIO AED:0.16 Chr04 + View
Malus domestica MD02G1072100 SNF7 family protein Chr02 - View
Malus domestica MD15G1201900 SNF7 family protein Chr15 - View
Manihot esculenta Manes.03G029850 Chromosome03 - View
Manihot esculenta Manes.16G105800 Chromosome16 + View
Medicago truncatula Medtr6g090515 charged multivesicular body protein chr6 + View
Medicago truncatula Medtr8g102020 charged multivesicular body protein chr8 + View
Nelumbo nucifera Nn6g35374 chr6 - View
Nelumbo nucifera Nn8g38976 chr8 + View
Nicotiana tabacum Nitab4.5_0003781g0030 Snf7 Nitab4.5_0003781 + View
Nicotiana tabacum Nitab4.5_0000540g0050 Snf7 Nitab4.5_0000540 - View
Olea europaea Oeu057341.1 chr9 + View
Olea europaea Oeu021465.1 chr2 - View
Olea europaea Oeu000335.2 chr17 + View
Petunia axillaris Peaxi162Scf00498g00027 Vacuolar protein sorting-associated protein 32 homolog 2 Peaxi162Scf00498 - View
Punica granatum PGR044G0998 NC_045134.1 + View
Pisum sativum Psat1g048960 Snf7 chr1LG6 - View
Papaver somniferum PSO210G3013 NC_039359.1 - View
Papaver somniferum PSO210G0159 NC_039359.1 + View
Papaver somniferum PSO063G1194 NC_039364.1 - View
Populus trichocarpa Potri.018G069900 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Chr18 - View
Phaseolus vulgaris Phvul.002G305900 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Chr02 + View
Phaseolus vulgaris Phvul.004G173000 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) Chr04 + View
Quercus lobata QL02p001812 CM012294 + View
Quercus lobata QL02p040039 CM012294 + View
Rosa chinensis RcHm_v2.0_Chr2g0092461 RcHm_v2.0_Chr2 - View
Rhododendron simsii Rhsim03G0235300 chr03 + View
Rhododendron simsii Rhsim05G0029900 chr05 - View
Salvia bowleyana SalBow1G8288 GWHASIU00000001 + View
Simmondsia chinensis Sc08g0008250 GWHAASQ00000008 + View
Simmondsia chinensis Sc18g0001810 GWHAASQ00000018 + View
Sechium edule Sed0020053 LG03 + View
Sechium edule Sed0005762 LG08 + View
Sechium edule Sed0023830 LG12 - View
Solanum lycopersicum Solyc08g065900.4 Vacuolar protein sorting-associated protein 32 (AHRD V3.3 *** A0A2U1MKD2_ARTAN) SL4.0ch08 + View
Schrenkiella parvula Sp7g27090 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) ch7-5 + View
Schrenkiella parvula Sp3g33190 K12194 - charged multivesicular body protein 4 (CHMP4, SNF7, VPS32) ch3-6 - View
Solanum pennellii Sopen08g019600 SNF7.1 | CONTAINS InterPro DOMAIN/s: Snf7 | BEST Arabidopsis thaliana protein match is: SNF7 family protein Spenn-ch08 + View
Solanum tuberosum PGSC0003DMG400013827 Charged multivesicular body protein 4b ST4.03ch08 + View
Trochodendron aralioides TAR624G1432 group9 + View
Trochodendron aralioides TAR636G2067 group1 - View
Trochodendron aralioides TAR626G1982 group3 - View
Theobroma cacao Thecc.09G095400 Vacuolar protein sorting-associated protein 32 Chromosome_9 + View
Tarenaya hassleriana THA.LOC104814576 vacuolar protein sorting-associated protein 32 homolog 2-like NW_010965451.1 + View
Tarenaya hassleriana THA.LOC104820039 vacuolar protein sorting-associated protein 32 homolog 2 NW_010966177.1 - View
Trifolium pratense TPR.G25486 Tp57577_TGAC_v2_scaf_162 - View
Tripterygium wilfordii TWI63G1284 NC_052240.1 - View
Tripterygium wilfordii TWI34G0555 NC_052235.1 + View
Tripterygium wilfordii TWI32G1212 NC_052254.1 - View
Vaccinium macrocarpon vmacro06267 Similar to VPS32.2: Vacuolar protein sorting-associated protein 32 homolog 2 (Arabidopsis thaliana OX%3D3702) chr2_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro10827 Similar to VPS32.1: Vacuolar protein sorting-associated protein 32 homolog 1 (Arabidopsis thaliana OX%3D3702) chr3_Vaccinium_macrocarpon_Stevens_v1 - View
Vigna mungo VMungo0251G1764 CM024069.1 + View
Vigna mungo VMungo0464G0498 CM024077.1 - View
Vitis vinifera GSVIVG01016913001 chr9 - View
Vitis vinifera GSVIVG01015258001 chr11 + View