Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Potri.007G137300 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) Chr07 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG2G21970 LG-2 + View
Acer truncatum Atru.chr6.2875 chr6 + View
Actinidia chinensis Actinidia11004 Lachesis_group19 + View
Actinidia chinensis Actinidia11101 Lachesis_group5 + View
Arabidopsis lyrata AL7G24110 scaffold_7 + View
Avicennia marina MSTRG.15131 ScioBoG_19538_HRSCAF_19626 + View
Aquilegia oxysepala Aqoxy4G00646 CHR04 + View
Arabidopsis thaliana AT4G28450 WD repeat and SOF domain-containing protein 1 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase nucleotide binding%3Bprotein binding%3B CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782)%2C WD40 repeat%2C conserved site (InterPro:IPR019775)%2C WD40 repeat (InterPro:IPR001680)%2C Sof1-like protein (InterPro:IPR007287)%2C G-protein beta WD-40 repeat%2C region (InterPro:IPR020472)%2C WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein (TAIR:AT4G02730.1)%3B Has 37337 Blast hits to 21127 proteins in 676 species: Archae - 38%3B Bacteria - 5948%3B Metazoa - 14528%3B Fungi - 7710%3B Plants - 4379%3B Viruses - 0%3B Other Eukaryotes - 4734 (source: NCBI BLink). Chr4 - View
Brassica napus C07p56220 C07 - View
Brassica napus A03p58100 A03 - View
Brassica oleracea BolC7t46099H C7 - View
Brassica rapa BraA03t14876Z A03 - View
Beta vulgaris EL10Ac9g20811 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) Chr9_EL10_PGA_scaffold8 - View
Camellia sinensis var. sinensis CSS0024007 PREDICTED: DDB1- and CUL4-associated factor 13 [Sesamum indicum] Chr7 - View
Capsicum annuum CAN.G209.6 PGAv.1.6.scaffold209 + View
Cannabis sativa CANSAT64G1696 NC_044379.1 - View
Coffea canephora Cc05_g07670 DDB1- and CUL4-associated factor 13 chr5 - View
Citrus clementina Ciclev10015209m.g scaffold_2 + View
Carpinus fangiana Cfa014656 Cfa06 - View
Cardamine hirsuta CARHR236220 WD-repeat protein, putative Chr7 - View
Carya illinoinensis CiPaw.03G181000 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) Chr03 - View
Citrullus lanatus ClCG02G002370 DDB1-and CUL4-associated factor CG_Chr02 + View
Cucumis melo MELO3C018869.2 DDB1-and CUL4-associated factor 13 chr01 + View
Carica papaya Cpa.g.sc83.89 supercontig_83 - View
Capsella rubella Carub.0007s1225 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) scaffold_7 + View
Cucumis sativus L. CsaV3_7G003080 DDB1- and CUL4-associated factor 13 chr7 - View
Daucus carota DCAR_013032 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv10164 GWHABJS00000001 + View
Eucalyptus grandis Eucgr.K01052 Chr11 - View
Eutrema salsugineum Thhalv10025176m.g K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) scaffold_1 + View
Gossypium hirsutum Gohir.A03G154700 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) A03 + View
Gossypium hirsutum Gohir.D02G177700 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) D02 + View
Gossypium raimondii Gorai.005G199500 Chr05 + View
Hydrangea macrophylla Hma1.2p1_0002F.1_g002200 Hma1.2p1_0002F.1 - View
Lotus japonicus Lj3g0012051 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) chr3 + View
Lonicera japonica Lj8C108T5 GWHAAZE00000008 + View
Magnolia biondii MBI07_g29117_MAGBIO AED:0.39 Chr07 - View
Manihot esculenta Manes.13G142500 Chromosome13 + View
Nelumbo nucifera Nn1g06426 chr1 + View
Olea europaea Oeu016012.1 chr23 + View
Petunia axillaris Peaxi162Scf00845g00022 DDB1- and CUL4-associated factor 13 Peaxi162Scf00845 + View
Punica granatum PGR142G4043 NC_045128.1 + View
Papaver somniferum PSO832G1390 NC_039367.1 - View
Papaver somniferum PSO210G7210 NC_039359.1 + View
Quercus lobata QL08p040074 8 - View
Rhododendron simsii Rhsim06G0138000 chr06 + View
Striga asiatica SGA_v2.0_scaffold70G23496 scaffold70 + View
Salix brachista Sabra17G0011900 GWHAAZH00000017 - View
Simmondsia chinensis Sc21g0003230 GWHAASQ00000021 - View
Solanum lycopersicum Solyc07g053660.3 WD40 repeat (AHRD V3.3 *** A0A200R1Q4_9MAGN) SL4.0ch07 + View
Schrenkiella parvula Sp7g26430 K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) ch7-5 - View
Solanum pennellii Sopen07g027630 This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase | nucleotide binding, protein binding | CONTAINS InterPro DOMAIN/s: WD40 repeat 2 , WD40 repeat, conserved site , WD40 repeat , Sof1-like protein , G-protein beta WD-40 repeat, region , WD40 repeat-like-containing domain , WD40-repeat-containing domain , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: Transducin/WD40 repeat-like superfamily protein Spenn-ch07 + View
Solanum tuberosum PGSC0003DMG401009395 U3 small nucleolar RNA (U3 snorna) associated protein ST4.03ch07 - View
Selenicereus undatus Hund07915 Scaffold_33676 - View
Trochodendron aralioides TAR626G1404 group3 - View
Trochodendron aralioides TAR624G0407 group9 + View
Theobroma cacao Thecc.02G185400 Nucleotide binding Chromosome_2 - View
Tarenaya hassleriana THA.LOC104804051 DDB1- and CUL4-associated factor 13 NW_010971389.1 + View
Tripterygium wilfordii TWI14G0319 NC_052249.1 - View
Tripterygium wilfordii TWI59G1106 NC_052248.1 + View
Vitis vinifera GSVIVG01020601001 chr12 + View