Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG5G8270 LG-5 - View
Acer truncatum Atru.chr3.3337 chr3 + View
Arabidopsis lyrata AL4G22580 scaffold_4 - View
Avicennia marina MSTRG.17715 ScioBoG_19834_HRSCAF_19925 + View
Amaranthus hybridus Ah.08g215960 AmaHy_arrow1_Scaffold_8 + View
Arabidopsis thaliana AT2G27710 60S acidic ribosomal protein family 60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%2C response to cold%3B LOCATED IN: in 8 components%3B EXPRESSED IN: 24 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27720.1)%3B Has 1875 Blast hits to 1874 proteins in 360 species: Archae - 31%3B Bacteria - 1%3B Metazoa - 679%3B Fungi - 442%3B Plants - 437%3B Viruses - 0%3B Other Eukaryotes - 285 (source: NCBI BLink). Chr2 + View
Arabidopsis thaliana AT3G44590 60S acidic ribosomal protein family 60S acidic ribosomal protein family%3B FUNCTIONS IN: structural constituent of ribosome%3B INVOLVED IN: translational elongation%3B LOCATED IN: cytosol%2C cytosolic ribosome%2C ribosome%2C nucleus%3B EXPRESSED IN: 25 plant structures%3B EXPRESSED DURING: 15 growth stages%3B CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813)%3B BEST Arabidopsis thaliana protein match is: 60S acidic ribosomal protein family (TAIR:AT2G27710.4)%3B Has 2091 Blast hits to 2090 proteins in 382 species: Archae - 63%3B Bacteria - 0%3B Metazoa - 803%3B Fungi - 479%3B Plants - 427%3B Viruses - 0%3B Other Eukaryotes - 319 (source: NCBI BLink). Chr3 + View
Brassica carinata BcaB02g10109 ChrB02 + View
Brassica carinata BcaC02g08236 ChrC02 - View
Beta vulgaris EL10Ac7g16955 PTHR21141//PTHR21141:SF50 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // SUBFAMILY NOT NAMED Chr7_EL10_PGA_scaffold5 + View
Beta vulgaris EL10Ac7g15791 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Chr7_EL10_PGA_scaffold5 - View
Capsicum annuum CAN.G919.15 PGAv.1.6.scaffold919 - View
Corylus avellana Haze_19567 Similar to 60S acidic ribosomal protein P2 (Parthenium argentatum OX%3D35935) 10 - View
Corylus avellana Haze_23426 Similar to RPP2B: 60S acidic ribosomal protein P2B (Zea mays OX%3D4577) 6 + View
Coffea canephora Cc06_g05500 60S acidic ribosomal protein P2B chr6 + View
Coffea canephora Cc01_g09540 60S acidic ribosomal protein P2B chr1 + View
Citrus clementina Ciclev10029621m.g scaffold_8 + View
Citrus clementina Ciclev10013051m.g scaffold_6 + View
Carpinus fangiana Cfa010059 Cfa04 + View
Cardamine hirsuta CARHR120390 60S acidic ribosomal protein P2-2 Chr4 + View
Carya illinoinensis CiPaw.13G139100 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Chr13 + View
Carya illinoinensis CiPaw.09G010500 PTHR21141//PTHR21141:SF48//PTHR21141:SF50 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // 60S ACIDIC RIBOSOMAL PROTEIN P2-4 // SUBFAMILY NOT NAMED Chr09 - View
Carya illinoinensis CiPaw.14G102300 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Chr14 + View
Cucumis melo MELO3C021436.2 60S acidic ribosomal protein P2B-like chr11 - View
Chenopodium quinoa AUR62009794 RPP2B: 60S acidic ribosomal protein P2B C_Quinoa_Scaffold_2493 + View
Capsella rubella Carub.0004s0846 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) scaffold_4 + View
Cucumis sativus L. CsaV3_6G014880 60S acidic ribosomal protein chr6 - View
Daucus carota DCAR_012179 hypothetical protein DCARv2_Chr3 - View
Durio zibethinus Duzib168G1326 NW_019168159.1 + View
Durio zibethinus Duzib093G1815 NW_019167937.1 + View
Durio zibethinus Duzib150G0915 NW_019167882.1 - View
Durio zibethinus Duzib170G0664 NW_019167871.1 + View
Erigeron canadensis ECA238G0252 Conyza_canadensis_scaffold:6 + View
Eucalyptus grandis Eucgr.J00465 Chr10 - View
Erythranthe guttata Migut.N02502 scaffold_14 + View
Fragaria x ananassa FAN05G5031 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Fvb6-3 + View
Fragaria x ananassa FAN05G0556 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Fvb6-3 + View
Fragaria vesca FvH4_6g18210 KOG3449 - 60S acidic ribosomal protein P2 Fvb6 - View
Gossypium hirsutum Gohir.A09G138000 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) A09 - View
Gossypium hirsutum Gohir.A07G108600 PTHR21141//PTHR21141:SF48 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // 60S ACIDIC RIBOSOMAL PROTEIN P2-4 A07 - View
Gossypium hirsutum Gohir.D07G112400 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) D07 - View
Gossypium hirsutum Gohir.D09G136600 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) D09 + View
Gossypium hirsutum Gohir.D05G085500 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) D05 + View
Glycine max Glyma.13G318200 PTHR21141//PTHR21141:SF48 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // 60S ACIDIC RIBOSOMAL PROTEIN P2-4 Gm13 + View
Glycine max Glyma.12G182800 PTHR21141//PTHR21141:SF48 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // 60S ACIDIC RIBOSOMAL PROTEIN P2-4 Gm12 - View
Glycine max Glyma.03G193100 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Gm03 - View
Gossypium raimondii Gorai.006G156700 Chr06 + View
Lupinus albus Lalb_Chr19g0136671 PTHR21141//PTHR21141:SF48 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // 60S ACIDIC RIBOSOMAL PROTEIN P2-4 Lalb_Chr19 + View
Lotus japonicus Lj3g0018750 PTHR21141//PTHR21141:SF48 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // 60S ACIDIC RIBOSOMAL PROTEIN P2-4 chr3 + View
Lactuca sativa Lsat_1_v5_gn_6_39761 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Lsat_1_v8_lg_6 + View
Malus domestica MD03G1138800 60S acidic ribosomal protein family Chr03 - View
Malus domestica MD14G1018800 60S acidic ribosomal protein family Chr14 - View
Malus domestica MD11G1160300 60S acidic ribosomal protein family Chr11 - View
Manihot esculenta Manes.09G058900 Chromosome09 + View
Manihot esculenta Manes.11G159600 Chromosome11 - View
Nelumbo nucifera Nn2g14069 chr2 - View
Punica granatum PGR119G1143 NC_045132.1 + View
Punica granatum PGR102G1637 NC_045129.1 - View
Prunus persica Prupe.7G114700 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Pp07 + View
Populus trichocarpa Potri.004G185800 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Chr04 + View
Populus trichocarpa Potri.010G236400 PTHR21141//PTHR21141:SF50 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER // SUBFAMILY NOT NAMED Chr10 - View
Populus trichocarpa Potri.009G146200 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Chr09 + View
Phaseolus vulgaris Phvul.001G188201 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) Chr01 - View
Phaseolus vulgaris Phvul.005G126000 PTHR21141:SF48 - 60S ACIDIC RIBOSOMAL PROTEIN P2-4 Chr05 + View
Quercus lobata QL07p039803 7 + View
Quercus lobata QL01p013264 1 + View
Rosa chinensis RcHm_v2.0_Chr3g0472541 RcHm_v2.0_Chr3 - View
Salvia bowleyana SalBow6G6476 GWHASIU00000002 + View
Salvia bowleyana SalBow3G3690 GWHASIU00000006 + View
Salix brachista Sabra04G0125100 GWHAAZH00000004 + View
Salix brachista Sabra10G0183500 GWHAAZH00000010 - View
Salix brachista Sabra09G0113100 GWHAAZH00000009 + View
Simmondsia chinensis Sc12g0004310 GWHAASQ00000012 - View
Solanum lycopersicum Solyc06g074430.4 60S acidic ribosomal protein P2 (AHRD V3.3 *** A0A2G2ZDK5_CAPAN),Pfam:PF00428 SL4.0ch06 + View
Solanum lycopersicum Solyc11g067100.2 60S acidic ribosomal protein family (AHRD V3.3 *-* F4IGR3_ARATH),Pfam:PF00428 SL4.0ch11 - View
Schrenkiella parvula Sp4g10490 K02943 - large subunit ribosomal protein LP2 (RP-LP2, RPLP2) ch4-6 + View
Solanum pennellii Sopen06g030910 hypothetical protein Spenn-ch06 + View
Solanum pennellii Sopen11g026810 hypothetical protein Spenn-ch11 - View
Solanum tuberosum PGSC0003DMG400007119 60s acidic ribosomal protein ST4.03ch06 + View
Solanum tuberosum PGSC0003DMG400007410 60s acidic ribosomal protein ST4.03ch11 - View
Selenicereus undatus Hund18737 Scaffold_33675 - View
Trochodendron aralioides TAR636G3209 group1 - View
Trochodendron aralioides TAR633G0946 group2 + View
Trochodendron aralioides TAR623G0961 group7 + View
Theobroma cacao Thecc.09G288100 60S acidic ribosomal protein P2B Chromosome_9 + View
Theobroma cacao Thecc.05G085000 60S acidic ribosomal protein P2-4 Chromosome_5 - View
Tarenaya hassleriana THA.LOC104800542 60S acidic ribosomal protein P2-1-like NW_010969548.1 + View
Tripterygium wilfordii TWI79G0896 NC_052238.1 - View
Tripterygium wilfordii TWI31G1129 NC_052233.1 - View
Tripterygium wilfordii TWI75G0663 NC_052253.1 - View
Utricularia gibba unitig_0.g1483 unitig_0 + View
Vitis vinifera GSVIVG01033814001 chr8 - View
Vitis vinifera GSVIVG01031366001 chr6 - View