Paralogs (intra-species colinear regions)

No paralogous anchorpoints available

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr3.2103 chr3 + View
Actinidia chinensis Actinidia16242 Lachesis_group24 - View
Arabidopsis lyrata AL3G25400 scaffold_3 - View
Arabidopsis thaliana AT3G13490 Lysyl-tRNA synthetase, class II Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. OVULE ABORTION 5 (OVA5)%3B FUNCTIONS IN: aminoacyl-tRNA ligase activity%2C nucleotide binding%2C ATP binding%2C nucleic acid binding%2C lysine-tRNA ligase activity%3B INVOLVED IN: tRNA aminoacylation for protein translation%2C ovule development%3B LOCATED IN: mitochondrion%2C chloroplast%2C cytoplasm%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 13 growth stages%3B CONTAINS InterPro DOMAIN/s: Nucleic acid-binding%2C OB-fold (InterPro:IPR012340)%2C Nucleic acid binding%2C OB-fold%2C tRNA/helicase-type (InterPro:IPR004365)%2C Aminoacyl-tRNA synthetase%2C class II%2C conserved domain (InterPro:IPR006195)%2C Nucleic acid-binding%2C OB-fold-like (InterPro:IPR016027)%2C Aminoacyl-tRNA synthetase%2C class II (D/K/N) (InterPro:IPR004364)%2C Lysyl-tRNA synthetase%2C class II%2C C-terminal (InterPro:IPR018149)%2C Aminoacyl-tRNA synthetase%2C class II (D/K/N)-like (InterPro:IPR018150)%2C Lysyl-tRNA synthetase%2C class II (InterPro:IPR002313)%3B BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 (TAIR:AT3G11710.1)%3B Has 27489 Blast hits to 22097 proteins in 2943 species: Archae - 404%3B Bacteria - 18954%3B Metazoa - 615%3B Fungi - 809%3B Plants - 266%3B Viruses - 0%3B Other Eukaryotes - 6441 (source: NCBI BLink). Chr3 - View
Brassica napus A05p36040 A05 + View
Camellia sinensis var. sinensis CSS0028494 PREDICTED: probable lysine--tRNA ligase, cytoplasmic [Malus domestica] Chr11 - View
Citrus clementina Ciclev10014735m.g scaffold_2 - View
Cardamine hirsuta CARHR088160 Lysine--tRNA ligase Chr3 - View
Citrullus lanatus ClCG02G024400 Lysine--tRNA ligase CG_Chr02 + View
Capsella rubella Carub.0003s1296 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE scaffold_3 - View
Cucumis sativus L. CsaV3_4G017540 Lysine--tRNA ligase chr4 + View
Davidia involucrata Dinv13475 GWHABJS00000007 + View
Durio zibethinus Duzib168G2316 NW_019168159.1 - View
Erythranthe guttata Migut.N00550 scaffold_14 - View
Eutrema salsugineum Thhalv10020319m.g PTHR22594:SF20 - LYSINE--TRNA LIGASE scaffold_13 + View
Fragaria x ananassa FAN16G2109 PTHR22594:SF20 - LYSINE--TRNA LIGASE Fvb3-3 + View
Fragaria x ananassa FAN25G0602 K04567 - lysyl-tRNA synthetase, class II (KARS, lysS) Fvb3-1 - View
Fragaria vesca FvH4_3g45770 K04567 - lysyl-tRNA synthetase, class II (KARS, lysS) Fvb3 + View
Malus domestica MD03G1003300 Lysyl-tRNA synthetase Chr03 - View
Malus domestica MD11G1003100 Lysyl-tRNA synthetase Chr11 - View
Manihot esculenta Manes.03G087300 Chromosome03 - View
Nelumbo nucifera Nn2g15862 chr2 + View
Olea europaea Oeu004752.1 chr22 + View
Punica granatum PGR119G2138 NC_045132.1 - View
Prunus persica Prupe.6G002900 PTHR22594:SF20 - LYSINE--TRNA LIGASE Pp06 - View
Populus trichocarpa Potri.003G221600 PTHR22594//PTHR22594:SF20 - ASPARTYL/LYSYL-TRNA SYNTHETASE // LYSINE--TRNA LIGASE Chr03 + View
Rosa chinensis RcHm_v2.0_Chr5g0083841 RcHm_v2.0_Chr5 + View
Rhododendron simsii Rhsim13G0233000 chr13 + View
Striga asiatica SGA_v2.0_scaffold6G03312 scaffold6 + View
Salix brachista Sabra03G0164900 GWHAAZH00000003 + View
Sechium edule Sed0027407 LG01 + View
Schrenkiella parvula Sp3g11700 PTHR22594:SF20 - LYSINE--TRNA LIGASE ch3-1 - View
Solanum pennellii Sopen01g001560 Encodes a dual targeted lysyl-tRNA ligase that is found both in the mitochondrion and the chloroplast. Plants mutated in this gene exhibit an ovule abortion phenotype. | OVULE ABORTION 5 (OVA5) | FUNCTIONS IN: aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding, lysine-tRNA ligase activity | INVOLVED IN: tRNA aminoacylation for protein translation, ovule development | LOCATED IN: mitochondrion, chloroplast, cytoplasm | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold , Nucleic acid binding, OB-fold, tRNA/helicase-type , Aminoacyl-tRNA synthetase, class II, conserved domain , Nucleic acid-binding, OB-fold-like , Aminoacyl-tRNA synthetase, class II (D/K/N) , Lysyl-tRNA synthetase, class II, C-terminal , Aminoacyl-tRNA synthetase, class II (D/K/N)-like , Lysyl-tRNA synthetase, class II | BEST Arabidopsis thaliana protein match is: lysyl-tRNA synthetase 1 Spenn-ch01 - View
Solanum pennellii Sopen06g029700 Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS) - Oryza sativa (Rice), lysyl-tRNA synthetase 1 (ATKRS-1) | FUNCTIONS IN: ATP binding, lysine-tRNA ligase activity | INVOLVED IN: lysyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation | LOCATED IN: cytoplasm | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class II (D/K/N) , Nucleic acid-binding, OB-fold-like , Aminoacyl-tRNA synthetase, class II (D/K/N)-like , Nucleic acid binding, OB-fold, tRNA/helicase-type , Lysyl-tRNA synthetase, class II, C-terminal , Lysyl-tRNA synthetase, class II , Aminoacyl-tRNA synthetase, class II, conserved domain | BEST Arabidopsis thaliana protein match is: Lysyl-tRNA synthetase, class II Spenn-ch06 - View
Solanum tuberosum PGSC0003DMG400032166 Lysyl-tRNA synthetase ST4.03ch01 - View
Trochodendron aralioides TAR633G1259 group2 - View
Vitis vinifera GSVIVG01025473001 chr6 - View