Paralogs (intra-species colinear regions)
No paralogous anchorpoints available
Orthologs (inter-species colinear regions)
| Organism | Gene id | Description | Chromosome | Strand | Multiplicon |
|---|---|---|---|---|---|
| Aethionema arabicum | Aa31LG6G8320 | LG-6 | + | View | |
| Acer truncatum | Atru.chr13.1965 | chr13 | - | View | |
| Actinidia chinensis | Actinidia17754 | Lachesis_group26 | - | View | |
| Arabidopsis lyrata | AL1G48650 | scaffold_1 | + | View | |
| Avicennia marina | MSTRG.22119 | ScioBoG_3008_HRSCAF_3015 | - | View | |
| Aquilegia oxysepala | Aqoxy5G02015 | CHR05 | - | View | |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.A75B0U | K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) | arahy.Tifrunner.gnm1.Arahy.19 | - | View |
| Arachis hypogaea | arahy.Tifrunner.gnm1.ann1.3U6NKV | K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) | arahy.Tifrunner.gnm1.Arahy.09 | + | View |
| Arabidopsis thaliana | AT1G34150 | Pseudouridine synthase family protein Pseudouridine synthase family protein%3B FUNCTIONS IN: pseudouridine synthase activity%3B INVOLVED IN: pseudouridine synthesis%2C RNA modification%3B LOCATED IN: cellular_component unknown%3B EXPRESSED IN: 21 plant structures%3B EXPRESSED DURING: 14 growth stages%3B CONTAINS InterPro DOMAIN/s: Pseudouridine synthase%2C catalytic domain (InterPro:IPR020103)%2C Pseudouridine synthase I%2C TruA%2C N-terminal (InterPro:IPR020094)%2C Pseudouridine synthase I%2C TruA%2C alpha/beta domain (InterPro:IPR020097)%2C Pseudouridine synthase I%2C TruA%2C C-terminal (InterPro:IPR020095)%2C Pseudouridine synthase I%2C TruA (InterPro:IPR001406)%3B BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT3G06950.1)%3B Has 7569 Blast hits to 7566 proteins in 2644 species: Archae - 155%3B Bacteria - 5313%3B Metazoa - 277%3B Fungi - 265%3B Plants - 164%3B Viruses - 0%3B Other Eukaryotes - 1395 (source: NCBI BLink). | Chr1 | + | View |
| Brassica carinata | BcaC08g43808 | ChrC08 | - | View | |
| Brassica napus | C06p11890 | C06 | - | View | |
| Brassica oleracea | BolC6t36321H | C6 | - | View | |
| Brassica rapa | BraA09t38776Z | A09 | - | View | |
| Beta vulgaris | EL10Ac1g01637 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Chr1_EL10_PGA_scaffold3 | + | View |
| Camellia sinensis var. sinensis | CSS0015534 | PREDICTED: tRNA pseudouridine(38/39) synthase isoform X2 [Vitis vinifera] | Contig1276 | + | View |
| Camellia sinensis var. sinensis | CSS0031675 | PREDICTED: tRNA pseudouridine(38/39) synthase isoform X2 [Vitis vinifera] | Chr9 | + | View |
| Cannabis sativa | CANSAT25G2324 | NC_044370.1 | - | View | |
| Cicer arietinum L. | Ca_10644_v3 | Ca_LG4_v3 | - | View | |
| Corylus avellana | Haze_17834 | Protein of unknown function | 7 | + | View |
| Coffea canephora | Cc10_g06370 | Putative tRNA pseudouridine(38/39) synthase | chr10 | - | View |
| Citrus clementina | Ciclev10001190m.g | scaffold_5 | + | View | |
| Carpinus fangiana | Cfa018255 | Cfa07 | - | View | |
| Cardamine hirsuta | CARHR033660 | Pseudouridine synthase | Chr1 | + | View |
| Carya illinoinensis | CiPaw.15G011200 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Chr15 | - | View |
| Citrullus lanatus | ClCG08G007170 | tRNA pseudouridine synthase | CG_Chr08 | - | View |
| Cucumis melo | MELO3C019957.2 | tRNA pseudouridine synthase | chr03 | + | View |
| Carica papaya | Cpa.g.sc26.127 | supercontig_26 | + | View | |
| Chenopodium quinoa | AUR62034929 | PUS3: tRNA pseudouridine(38/39) synthase | C_Quinoa_Scaffold_3617 | + | View |
| Capsella rubella | Carub.0001s3222 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | scaffold_1 | + | View |
| Cucumis sativus L. | CsaV3_6G004840 | tRNA pseudouridine synthase | chr6 | - | View |
| Davidia involucrata | Dinv41018 | GWHABJS00000002 | + | View | |
| Durio zibethinus | Duzib093G0465 | NW_019167937.1 | + | View | |
| Erigeron canadensis | ECA247G4107 | Conyza_canadensis_scaffold:7 | + | View | |
| Eucalyptus grandis | Eucgr.F02671 | Chr06 | - | View | |
| Erythranthe guttata | Migut.N02937 | scaffold_14 | + | View | |
| Eutrema salsugineum | Thhalv10007608m.g | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | scaffold_5 | - | View |
| Fragaria x ananassa | FAN24G0542 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Fvb2-2 | + | View |
| Fragaria x ananassa | FAN15G2448 | K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) | Fvb2-4 | - | View |
| Fragaria vesca | FvH4_2g12780 | 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Fvb2 | - | View |
| Gossypium hirsutum | Gohir.A02G061800 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | A02 | - | View |
| Gossypium hirsutum | Gohir.D02G067400 | K01855 - tRNA pseudouridine38/39 synthase [EC:5.4.99.45] (PUS3, DEG1) | D02 | - | View |
| Glycine max | Glyma.20G171700 | 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Gm20 | + | View |
| Glycine max | Glyma.10G220000 | 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Gm10 | - | View |
| Gossypium raimondii | Gorai.005G076300 | Chr05 | - | View | |
| Hydrangea macrophylla | Hma1.2p1_0358F.1_g134900 | Hma1.2p1_0358F.1 | + | View | |
| Lupinus albus | Lalb_Chr02g0141641 | 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Lalb_Chr02 | + | View |
| Lonicera japonica | Lj7C387T6 | GWHAAZE00000007 | + | View | |
| Lactuca sativa | Lsat_1_v5_gn_1_5920 | Lsat_1_v8_lg_1 | + | View | |
| Malus domestica | MD05G1036800 | Pseudouridine synthase family protein | Chr05 | + | View |
| Manihot esculenta | Manes.02G186000 | Chromosome02 | + | View | |
| Medicago truncatula | Medtr1g097390 | tRNA pseudouridine synthase A | chr1 | - | View |
| Nelumbo nucifera | Nn5g28881 | chr5 | + | View | |
| Nicotiana tabacum | Nitab4.5_0000433g0050 | Pseudouridine synthase I, TruA, Pseudouridine synthase I, TruA, alpha/beta domain, Pseudouridine synthase I, TruA, N-terminal, Pseudouridine synthase, catalytic domain, Pseudouridine synthase I, TruA, C-terminal | Nitab4.5_0000433 | + | View |
| Nicotiana tabacum | Nitab4.5_0001000g0130 | Pseudouridine synthase I, TruA, N-terminal, Pseudouridine synthase I, TruA, C-terminal, Pseudouridine synthase I, TruA, alpha/beta domain, Pseudouridine synthase I, TruA, Pseudouridine synthase, catalytic domain | Nitab4.5_0001000 | - | View |
| Petunia axillaris | Peaxi162Scf00226g00219 | tRNA pseudouridine(38/39) synthase | Peaxi162Scf00226 | + | View |
| Punica granatum | PGR042G2919 | NC_045130.1 | - | View | |
| Prunus persica | Prupe.8G045000 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Pp08 | + | View |
| Papaver somniferum | PSO170G2558 | NC_039360.1 | - | View | |
| Papaver somniferum | PSO210G7095 | NC_039359.1 | - | View | |
| Populus trichocarpa | Potri.002G061650 | 4.2.1.70//5.4.99.12//5.4.99.45 - Pseudouridylate synthase / Uracil hydrolyase // tRNA pseudouridine(38-40) synthase / tRNA pseudouridylate synthase I // tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Chr02 | - | View |
| Phaseolus vulgaris | Phvul.007G085300 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | Chr07 | + | View |
| Quercus lobata | QL02p036335 | CM012294 | - | View | |
| Rosa chinensis | RcHm_v2.0_Chr6g0273621 | RcHm_v2.0_Chr6 | - | View | |
| Salvia bowleyana | SalBow6G4612 | GWHASIU00000002 | - | View | |
| Salix brachista | Sabra02G0049900 | GWHAAZH00000002 | - | View | |
| Sechium edule | Sed0016594 | LG03 | + | View | |
| Sapria himalayana | SHI09122 | scaffold9_16683904 | + | View | |
| Solanum lycopersicum | Solyc04g072140.4 | tRNA pseudouridine synthase (AHRD V3.3 *** A0A2G3CNB1_CAPCH) | SL4.0ch04 | + | View |
| Schrenkiella parvula | Sp1g29390 | 5.4.99.45 - tRNA pseudouridine(38/39) synthase / Pseudouridine synthase 3 | ch1-1 | + | View |
| Solanum pennellii | Sopen04g028310 | Pseudouridine synthase family protein | FUNCTIONS IN: pseudouridine synthase activity | INVOLVED IN: pseudouridine synthesis, RNA modification | LOCATED IN: cellular_component unknown | EXPRESSED IN: 21 plant structures | EXPRESSED DURING: 14 growth stages | CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain , Pseudouridine synthase I, TruA, N-terminal , Pseudouridine synthase I, TruA, alpha/beta domain , Pseudouridine synthase I, TruA, C-terminal , Pseudouridine synthase I, TruA | BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein | Spenn-ch04 | + | View |
| Solanum tuberosum | PGSC0003DMG400031154 | Pseudouridine synthase | ST4.03ch04 | + | View |
| Selenicereus undatus | Hund26667 | Scaffold_2055 | - | View | |
| Trochodendron aralioides | TAR625G0054 | group4 | + | View | |
| Theobroma cacao | Thecc.08G196200 | Uncharacterized protein | Chromosome_8 | + | View |
| Tarenaya hassleriana | THA.LOC104816107 | tRNA pseudouridine(38/39) synthase isoform X1 | NW_010960187.1 | + | View |
| Trifolium pratense | TPR.G23158 | Tp57577_TGAC_v2_scaf_986 | + | View | |
| Vigna mungo | VMungo0720G1747 | CM024071.1 | - | View | |
| Vitis vinifera | GSVIVG01013676001 | chr18_random | - | View |