Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lj7P717T54 GWHAAZE00000007 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG7G230 LG-7 + View
Acer truncatum Atru.chr1.3166 chr1 + View
Actinidia chinensis Actinidia08827 Lachesis_group2 - View
Actinidia chinensis Actinidia01778 Lachesis_group1 - View
Arabidopsis lyrata AL1G27630 scaffold_1 + View
Aquilegia oxysepala Aqoxy7G01928 CHR07 - View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.PALU6L PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) arahy.Tifrunner.gnm1.Arahy.19 + View
Arabidopsis thaliana AT1G15510 Tetratricopeptide repeat (TPR)-like superfamily protein Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis. EARLY CHLOROPLAST BIOGENESIS2 (ECB2)%3B CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885)%3B BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18750.1)%3B Has 49765 Blast hits to 13993 proteins in 266 species: Archae - 0%3B Bacteria - 6%3B Metazoa - 64%3B Fungi - 140%3B Plants - 48782%3B Viruses - 0%3B Other Eukaryotes - 773 (source: NCBI BLink). Chr1 + View
Brassica carinata BcaC05g25630 ChrC05 + View
Brassica carinata BcaC05g25502 ChrC05 + View
Brassica napus C05p13720 C05 + View
Brassica napus A06p11570 A06 + View
Brassica oleracea BolC5t30110H C5 + View
Beta vulgaris EL10Ac8g18566 Chr8_EL10_PGA_scaffold4 - View
Camellia sinensis var. sinensis CSS0038176 PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic [Vitis vinifera] Chr2 + View
Capsicum annuum CAN.G438.95 PGAv.1.6.scaffold438 + View
Cicer arietinum L. Ca_07172_v3 Ca_LG3_v3 - View
Corylus avellana Haze_21569 Similar to PCMP-H63: Pentatricopeptide repeat-containing protein At4g32450, mitochondrial (Arabidopsis thaliana OX%3D3702) 3 + View
Corylus avellana Haze_16488 Similar to PCMP-H73: Pentatricopeptide repeat-containing protein At1g15510, chloroplastic (Arabidopsis thaliana OX%3D3702) 11 - View
Corylus avellana Haze_25650 Similar to PCMP-E55: Pentatricopeptide repeat-containing protein At1g31430 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc04_g03770 Pentatricopeptide repeat-containing protein At1g15510, chloroplastic chr4 - View
Citrus clementina Ciclev10024866m.g scaffold_7 - View
Ceratophyllum demersum CDE07G1677 5 + View
Carpinus fangiana Cfa002031 Cfa01 + View
Carpinus fangiana Cfa003202 Cfa01 + View
Cardamine hirsuta CARHR016080 Pentatricopeptide repeat-containing protein Chr1 + View
Carya illinoinensis CiPaw.01G242600 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr01 - View
Carya illinoinensis CiPaw.03G237200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Chr03 - View
Citrullus lanatus ClCG09G002520 Pentatricopeptide repeat-containing family protein CG_Chr09 - View
Citrullus lanatus ClCG06G010540 Pentatricopeptide repeat-containing protein CG_Chr06 - View
Cucumis melo MELO3C023386.2 Pentatricopeptide repeat-containing family protein chr01 + View
Corchorus olitorius COL.COLO4_12858 hypothetical protein AWUE01014974.1 - View
Chenopodium quinoa AUR62033424 CRR21: Pentatricopeptide repeat-containing protein At5g55740, chloroplastic C_Quinoa_Scaffold_1765 - View
Capsella rubella Carub.0001s1529 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_1 + View
Cucumis sativus L. CsaV3_7G032800 Pentatricopeptide repeat-containing protein chr7 + View
Daucus carota DCAR_026293 hypothetical protein DCARv2_Chr7 + View
Daucus carota DCAR_025464 hypothetical protein DCARv2_Chr7 - View
Davidia involucrata Dinv30552 GWHABJS00000019 + View
Durio zibethinus Duzib150G1100 NW_019167882.1 - View
Durio zibethinus Duzib235G0798 NW_019167982.1 + View
Erigeron canadensis ECA234G2341 Conyza_canadensis_scaffold:4 - View
Eucalyptus grandis Eucgr.C04152 Chr03 - View
Eucalyptus grandis Eucgr.J03030 Chr10 - View
Eutrema salsugineum Thhalv10006770m.g PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) scaffold_5 - View
Fragaria x ananassa FAN28G2317 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1-1 - View
Fragaria x ananassa FAN14G1850 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-1 - View
Fragaria x ananassa FAN09G0501 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-2 - View
Fragaria x ananassa FAN19G1801 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Fvb1-4 - View
Fragaria x ananassa FAN02G1635 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Fvb6-4 + View
Fragaria x ananassa FAN05G3672 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6-3 - View
Fragaria vesca FvH4_6g30690 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Fvb6 + View
Gossypium hirsutum Gohir.D05G021300 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) D05 - View
Gossypium hirsutum Gohir.D03G065000 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) D03 + View
Gossypium hirsutum Gohir.A02G124200 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) A02 + View
Gossypium hirsutum Gohir.A05G020200 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) A05 - View
Glycine max Glyma.08G208902 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm08 - View
Glycine max Glyma.06G211900 PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Gm06 + View
Glycine max Glyma.07G033300 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Gm07 + View
Gossypium raimondii Gorai.002G057400 Chr02 + View
Hydrangea macrophylla Hma1.2p1_0018F.1_g012940 Hma1.2p1_0018F.1 - View
Lotus japonicus Lj3g0004519 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) chr3 - View
Lactuca sativa Lsat_1_v5_gn_4_104040 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Lsat_1_v8_lg_4 - View
Lactuca sativa Lsat_1_v5_gn_5_98381 Lsat_1_v8_lg_5 - View
Magnolia biondii MBI01_g15492_MAGBIO AED:0.33 Chr01 - View
Malus domestica MD17G1200900 ribonuclease 1 Chr17 + View
Manihot esculenta Manes.14G127400 Chromosome14 - View
Manihot esculenta Manes.04G119300 Chromosome04 + View
Manihot esculenta Manes.06G051200 Chromosome06 - View
Medicago truncatula Medtr4g011570 pentatricopeptide (PPR) repeat protein chr4 + View
Nelumbo nucifera Nn2g11881 chr2 + View
Nelumbo nucifera Nn8g39384 chr8 - View
Nicotiana tabacum Nitab4.5_0000410g0360 Pentatricopeptide repeat, Tetratricopeptide-like helical Nitab4.5_0000410 - View
Olea europaea Oeu052449.1 chr18 + View
Oryza sativa ssp. japonica Os01g0646000 Pentatricopeptide repeat domain containing protein. chr01 + View
Oryza sativa ssp. japonica Os06g0597500 Pentatricopeptide repeat protein, Regulation of inflorescence branch development chr06 - View
Oryza sativa ssp. japonica Os01g0176300 Pentatricopeptide repeat domain containing protein. chr01 - View
Petunia axillaris Peaxi162Scf00015g00530 Pentatricopeptide repeat-containing protein Peaxi162Scf00015 + View
Punica granatum PGR031G1598 NC_045127.1 + View
Prunus persica Prupe.7G235800 PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Pp07 - View
Prunus persica Prupe.3G077400 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Pp03 - View
Populus trichocarpa Potri.003G058300 PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Chr03 - View
Quercus lobata QL05p026958 5 - View
Quercus lobata QL02p086560 CM012294 - View
Rosa chinensis RcHm_v2.0_Chr2g0137061 RcHm_v2.0_Chr2 + View
Rosa chinensis RcHm_v2.0_Chr2g0089541 RcHm_v2.0_Chr2 - View
Rosa chinensis RcHm_v2.0_Chr2g0089161 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim08G0217800 chr08 + View
Simmondsia chinensis Sc18g0000890 GWHAASQ00000018 - View
Solanum lycopersicum Solyc03g119950.1 Pentatricopeptide repeat-containing protein, chloroplastic (AHRD V3.3 *** A0A2G2WPP9_CAPBA) SL4.0ch03 - View
Schrenkiella parvula Sp1g13870 PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) ch1-1 + View
Solanum pennellii Sopen03g038830 Encodes a pentatricopeptide repeat protein required for chloroplast transcript accD RNA editing and early chloroplast biogenesis. | EARLY CHLOROPLAST BIOGENESIS2 (ECB2) | CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein Spenn-ch03 - View
Solanum tuberosum PGSC0003DMG400005614 Pentatricopeptide repeat-containing protein ST4.03ch03 - View
Trochodendron aralioides TAR626G1516 group3 + View
Trochodendron aralioides TAR383G0072 group10 - View
Trochodendron aralioides TAR636G1012 group1 - View
Theobroma cacao Thecc.09G117700 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_9 - View
Theobroma cacao Thecc.06G077600 Tetratricopeptide repeat (TPR)-like superfamily protein Chromosome_6 + View
Tarenaya hassleriana THA.LOC104812484 pentatricopeptide repeat-containing protein At1g15510%2C chloroplastic NW_010965372.1 - View
Trifolium pratense TPR.G38622 Tp57577_TGAC_v2_LG4 - View
Tripterygium wilfordii TWI18G0952 NC_052241.1 - View
Vaccinium macrocarpon vmacro22607 Similar to PCMP-H5: Pentatricopeptide repeat-containing protein At4g37170 (Arabidopsis thaliana OX%3D3702) chr12_Vaccinium_macrocarpon_Stevens_v1 - View
Vaccinium macrocarpon vmacro18948 Similar to PCMP-H73: Pentatricopeptide repeat-containing protein At1g15510, chloroplastic (Arabidopsis thaliana OX%3D3702) chr5_Vaccinium_macrocarpon_Stevens_v1 - View
Vitis vinifera GSVIVG01017209001 chr9 - View
Vitis vinifera GSVIVG01035759001 chr4 - View