Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lj4P754T16 GWHAAZE00000004 + View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Acer truncatum Atru.chr13.849 chr13 - View
Actinidia chinensis Actinidia10210 Lachesis_group26 - View
Actinidia chinensis Actinidia19302 Lachesis_group28 - View
Arabidopsis lyrata AL1G40900 scaffold_1 - View
Avicennia marina MSTRG.24381 ScioBoG_4088_HRSCAF_4107 - View
Amaranthus hybridus Ah.05g167030 WD repeat-containing protein PCN (Protein POPCORN) AmaHy_arrow1_Scaffold_5 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.YU9IEB K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) arahy.Tifrunner.gnm1.Arahy.06 + View
Arachis hypogaea arahy.Tifrunner.gnm1.ann1.82WHW6 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) arahy.Tifrunner.gnm1.Arahy.16 + View
Arabidopsis thaliana AT4G07410 Transducin family protein / WD-40 repeat family protein Encodes a WD-40 protein expressed both during embryo development and postembryonically in the SAM and RAM that functions in the auxin pathway%2C integrating auxin signaling in the organization and maintenance of the SAM and RAM. Transducin family protein / WD-40 repeat family protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1)%3B Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12%3B Bacteria - 1396%3B Metazoa - 17338%3B Fungi - 3422%3B Plants - 5037%3B Viruses - 0%3B Other Eukaryotes - 2996 (source: NCBI BLink). Chr4 - View
Arabidopsis thaliana AT1G27470 transducin family protein / WD-40 repeat family protein transducin family protein / WD-40 repeat family protein%3B CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046)%2C WD40 repeat 2 (InterPro:IPR019782)%2C Cytochrome cd1-nitrite reductase-like%2C C-terminal haem d1 (InterPro:IPR011048)%2C WD40-repeat-containing domain (InterPro:IPR017986)%2C WD40 repeat (InterPro:IPR001680)%2C WD40/YVTN repeat-like-containing domain (InterPro:IPR015943)%2C WD40 repeat%2C subgroup (InterPro:IPR019781)%3B BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT4G07410.1)%3B Has 9350 Blast hits to 6259 proteins in 471 species: Archae - 14%3B Bacteria - 2955%3B Metazoa - 2262%3B Fungi - 2287%3B Plants - 792%3B Viruses - 0%3B Other Eukaryotes - 1040 (source: NCBI BLink). Chr1 - View
Amborella trichopoda ATR0739G177 AmTr_v1.0_scaffold00065 + View
Beta vulgaris EL10Ac1g02364 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Chr1_EL10_PGA_scaffold3 + View
Camellia sinensis var. sinensis CSS0046104 PREDICTED: U3 small nucleolar RNA-associated protein 4 [Vitis vinifera] Chr4 - View
Cicer arietinum L. Ca_13209_v3 Ca_LG4_v3 + View
Corylus avellana Haze_22418 Similar to PCN: WD repeat-containing protein PCN (Arabidopsis thaliana OX%3D3702) 3 + View
Coffea canephora Cc10_g05060 Putative Cirhin chr10 - View
Citrus clementina Ciclev10000301m.g scaffold_5 - View
Ceratophyllum demersum CDE04G2329 2 + View
Ceratophyllum demersum CDE07G0463 5 - View
Carpinus fangiana Cfa013762 Cfa05 + View
Carya illinoinensis CiPaw.07G173600 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Chr07 + View
Carya illinoinensis CiPaw.08G050900 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Chr08 - View
Citrullus lanatus ClCG05G020690 Transducin family protein / WD-40 repeat family protein LENGTH=815 CG_Chr05 - View
Cucumis melo MELO3C016827.2 Nucleotide binding protein, putative chr07 + View
Carica papaya Cpa.g.sc142.42 supercontig_142 - View
Chenopodium quinoa AUR62022465 CIRH1A: Cirhin C_Quinoa_Scaffold_3163 + View
Capsella rubella Carub.0001s2603 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) scaffold_1 - View
Cucumis sativus L. CsaV3_4G035140 U3 small nucleolar RNA-associated protein 4 chr4 - View
Daucus carota DCAR_009874 hypothetical protein DCARv2_Chr3 + View
Davidia involucrata Dinv39213 GWHABJS00000011 + View
Davidia involucrata Dinv44943 GWHABJS00000002 + View
Erigeron canadensis ECA247G0551 Conyza_canadensis_scaffold:7 - View
Eucalyptus grandis Eucgr.F02239 Chr06 - View
Erythranthe guttata Migut.N02791 scaffold_14 - View
Fragaria x ananassa FAN20G3047 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Fvb2-3 - View
Fragaria x ananassa FAN27G2988 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Fvb2-1 + View
Fragaria x ananassa FAN15G1506 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Fvb2-4 + View
Fragaria x ananassa FAN24G1723 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Fvb2-2 - View
Fragaria vesca FvH4_2g32880 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Fvb2 + View
Glycine max Glyma.14G089042 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Gm14 - View
Glycine max Glyma.17G233900 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Gm17 + View
Lupinus albus Lalb_Chr22g0355711 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Lalb_Chr22 - View
Lupinus albus Lalb_Chr14g0368121 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Lalb_Chr14 + View
Lotus japonicus Lj5g0007294 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) chr5 + View
Malus domestica MD15G1067400 Transducin family protein / WD-40 repeat family protein Chr15 + View
Malus domestica MD08G1080300 Transducin family protein / WD-40 repeat family protein Chr08 + View
Medicago truncatula Medtr1g017880 transducin/WD-like repeat-protein chr1 + View
Nicotiana tabacum Nitab4.5_0003725g0010 WD40 repeat, WD40/YVTN repeat-like-containing domain, WD40-repeat-containing domain Nitab4.5_0003725 + View
Nicotiana tabacum Nitab4.5_0000497g0070 WD40-repeat-containing domain, WD40 repeat, WD40/YVTN repeat-like-containing domain Nitab4.5_0000497 + View
Petunia axillaris Peaxi162Scf00081g02729 Transducin family protein / WD-40 repeat family protein Peaxi162Scf00081 - View
Petunia axillaris Peaxi162Scf00160g00521 Transducin family protein / WD-40 repeat family protein Peaxi162Scf00160 - View
Punica granatum PGR031G2627 NC_045127.1 + View
Prunus persica Prupe.1G421300 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Pp01 + View
Pisum sativum Psat6g017680 WD domain + G-beta repeat chr6LG2 + View
Populus trichocarpa Potri.014G014900 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Chr14 + View
Populus trichocarpa Potri.002G117500 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Chr02 + View
Phaseolus vulgaris Phvul.001G028900 K14548 - U3 small nucleolar RNA-associated protein 4 (UTP4, CIRH1A) Chr01 - View
Quercus lobata QL12p038269 12 - View
Rosa chinensis RcHm_v2.0_Chr6g0309831 RcHm_v2.0_Chr6 - View
Striga asiatica SGA_v2.0_scaffold152G36813 scaffold152 - View
Striga asiatica SGA_v2.0_scaffold28G11839 scaffold28 - View
Salvia bowleyana SalBow2G1921 GWHASIU00000007 + View
Salix brachista Sabra14G0008900 GWHAAZH00000014 + View
Salix brachista Sabra02G0092000 GWHAAZH00000002 + View
Simmondsia chinensis Sc02g0007980 GWHAASQ00000002 - View
Sechium edule Sed0028163 LG01 - View
Sechium edule Sed0011873 LG13 - View
Solanum lycopersicum Solyc04g077680.3 U3 small nucleolar RNA-associated protein 4 (AHRD V3.3 *** A0A2I4FQ80_9ROSI) SL4.0ch04 + View
Solanum lycopersicum Solyc12g088290.2 Transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** A0A2U1M3L2_ARTAN) SL4.0ch12 + View
Solanum pennellii Sopen12g030290 Transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat 2 , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein Spenn-ch12 + View
Solanum pennellii Sopen04g031320 Transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat 2 , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein Spenn-ch04 + View
Solanum tuberosum PGSC0003DMG400011543 Nucleotide binding protein ST4.03ch12 + View
Solanum tuberosum PGSC0003DMG401010623 Transducin family protein ST4.03ch04 + View
Selenicereus undatus Hund05292 Scaffold_19641 + View
Trochodendron aralioides TAR376G0365 group14 + View
Trochodendron aralioides TAR628G0363 group5 + View
Tarenaya hassleriana THA.LOC104825785 U3 small nucleolar RNA-associated protein 4 NW_010967605.1 - View
Trifolium pratense TPR.G12983 Tp57577_TGAC_v2_LG1 + View
Tripterygium wilfordii TWI56G1015 NC_052242.1 + View
Tripterygium wilfordii TWI12G0955 NC_052243.1 - View
Vigna mungo VMungo0647G0070 CM024073.1 - View
Vitis vinifera GSVIVG01009321001 chr18 + View
Zea mays Zm00001eb215430 Zm00001e012090 Transducin family protein / WD-40 repeat family protein 5 - View