Gene: Sopen12g030290

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen12g030290
  • Transcript Identifier Sopen12g030290.1
  • Gene Type Coding gene
  • Location Spenn-ch12 : 79552808-79561082 : positive

Gene Family Information

  • ID HOM05D003723
  • #Genes/#Species 185/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen12g030290.1

Descriptions

  • Description Transducin family protein / WD-40 repeat family protein | FUNCTIONS IN: nucleotide binding | INVOLVED IN: biological_process unknown | LOCATED IN: cellular_component unknown | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain , WD40 repeat 2 , WD40-repeat-containing domain , WD40 repeat , WD40/YVTN repeat-like-containing domain , WD40 repeat, subgroup | BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010073
IEA
InterPromeristem maintenance
GO:0035266
IEA
InterPromeristem growth
GO:0090696
ISO
PLAZA Integrative Orthologypost-embryonic plant organ development AT4G07410
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT4G07410
GO:0010449
ISO
PLAZA Integrative Orthologyroot meristem growth AT4G07410
GO:0048366
ISO
PLAZA Integrative Orthologyleaf development AT4G07410
GO:0010305
ISO
PLAZA Integrative Orthologyleaf vascular tissue pattern formation AT4G07410
GO:2000012
ISO
PLAZA Integrative Orthologyregulation of auxin polar transport AT4G07410
GO:0010311
ISO
PLAZA Integrative Orthologylateral root formation AT4G07410

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT4G07410

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR044622 WD repeat-containing protein PCN
Mapman id Description
17.1.3.2.1.2.1 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (UTP4/PCN)