Gene: AT4G07410

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G07410
  • Transcript Identifier AT4G07410.1
  • Gene Type Coding gene
  • Location Chr4 : 4201465-4205136 : negative

Gene Family Information

  • ID HOM05D003723
  • #Genes/#Species 185/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G07410.1
  • symbol PCN
  • full_name POPCORN
  • uniprot Q8RXU6

Descriptions

  • Description Transducin family protein / WD-40 repeat family protein
  • Computational description Transducin family protein / WD-40 repeat family protein; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: transducin family protein / WD-40 repeat family protein (TAIR:AT1G27470.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010449
IMP
Gene Ontologyroot meristem growth1
GO:0035266
IMP
IEA
Gene Ontologymeristem growth1
GO:0035266
IEA
InterPromeristem growth
GO:0010073
IMP
IEA
Gene Ontologymeristem maintenance1
GO:0010073
IEA
InterPromeristem maintenance
GO:2000012
IMP
Gene Ontologyregulation of auxin polar transport1
GO:0090696
IGI
Gene Ontologypost-embryonic plant organ development1
GO:0048366
IMP
Gene Ontologyleaf development1
GO:0010311
IMP
Gene Ontologylateral root formation1
GO:0010305
IMP
Gene Ontologyleaf vascular tissue pattern formation1
GO:0009793
IMP
Gene Ontologyembryo development ending in seed dormancy1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM
Gene Ontologynucleus1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR044622 WD repeat-containing protein PCN
IPR001680 WD40 repeat
Mapman id Description
17.1.3.2.1.2.1 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU processome.pre-40S ribosomal subunit nuclear assembly.UtpA module.assembly factor (UTP4/PCN)