Paralogs (intra-species colinear regions)

Gene id Description Chromosome Strand Multiplicon
Lj7C368T1 GWHAAZE00000007 - View
Lj4P694T22 GWHAAZE00000004 - View

Orthologs (inter-species colinear regions)

Organism Gene id Description Chromosome Strand Multiplicon
Aethionema arabicum Aa31LG8G5530 LG-8 - View
Aethionema arabicum Aa31LG1G17290 LG-1 + View
Acer truncatum Atru.chr4.777 chr4 + View
Actinidia chinensis Actinidia06644 Lachesis_group16 - View
Actinidia chinensis Actinidia15149 Lachesis_group26 + View
Actinidia chinensis Actinidia10667 Lachesis_group28 + View
Actinidia chinensis Actinidia09826 Lachesis_group11 + View
Arabidopsis lyrata AL6G20200 scaffold_6 - View
Arabidopsis lyrata AL3G32040 scaffold_3 - View
Arabidopsis lyrata AL8G42070 scaffold_8 - View
Avicennia marina MSTRG.23433 ScioBoG_3895_HRSCAF_3912 + View
Amaranthus hybridus Ah.03g146690 U-box domain-containing protein 27 (EC 2.3.2.27) (Plant U-box protein 27) (RING-type E3 ubiquitin transferase PUB27) AmaHy_arrow1_Scaffold_3 + View
Amaranthus hybridus Ah.05g167640 U-box domain-containing protein 28 (EC 2.3.2.27) (Plant U-box protein 28) (RING-type E3 ubiquitin transferase PUB28) AmaHy_arrow1_Scaffold_5 - View
Arabidopsis thaliana AT3G18710 plant U-box 29 Encodes a protein containing a U-box and an ARM domain. This protein has E3 ubiquitin ligase activity based on in vitro assays. plant U-box 29 (PUB29)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%3B INVOLVED IN: response to chitin%2C protein ubiquitination%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 22 plant structures%3B EXPRESSED DURING: 12 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1)%3B Has 1922 Blast hits to 1905 proteins in 98 species: Archae - 0%3B Bacteria - 12%3B Metazoa - 142%3B Fungi - 0%3B Plants - 1653%3B Viruses - 0%3B Other Eukaryotes - 115 (source: NCBI BLink). Chr3 - View
Arabidopsis thaliana AT5G64660 CYS, MET, PRO, and GLY protein 2 CYS%2C MET%2C PRO%2C and GLY protein 2 (CMPG2)%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: response to chitin%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 23 plant structures%3B EXPRESSED DURING: 11 growth stages%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1)%3B Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0%3B Bacteria - 0%3B Metazoa - 736%3B Fungi - 347%3B Plants - 385%3B Viruses - 0%3B Other Eukaryotes - 339 (source: NCBI BLink). Chr5 - View
Arabidopsis thaliana AT5G09800 ARM repeat superfamily protein ARM repeat superfamily protein%3B FUNCTIONS IN: ubiquitin-protein ligase activity%2C binding%3B INVOLVED IN: response to chitin%3B LOCATED IN: ubiquitin ligase complex%3B EXPRESSED IN: 10 plant structures%3B EXPRESSED DURING: L mature pollen stage%2C LP.06 six leaves visible%2C M germinated pollen stage%2C 4 anthesis%3B CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613)%2C Armadillo-like helical (InterPro:IPR011989)%2C Armadillo-type fold (InterPro:IPR016024)%3B BEST Arabidopsis thaliana protein match is: CYS%2C MET%2C PRO%2C and GLY protein 2 (TAIR:AT5G64660.1)%3B Has 1911 Blast hits to 1878 proteins in 97 species: Archae - 0%3B Bacteria - 16%3B Metazoa - 84%3B Fungi - 4%3B Plants - 1697%3B Viruses - 0%3B Other Eukaryotes - 110 (source: NCBI BLink). Chr5 - View
Brassica carinata BcaC05g28581 ChrC05 + View
Brassica carinata BcaB02g09809 ChrB02 - View
Brassica carinata BcaC04g23301 ChrC04 + View
Brassica carinata BcaC01g02696 ChrC01 - View
Brassica carinata BcaB06g25921 ChrB06 - View
Brassica napus C03p61530 C03 + View
Brassica napus A06p31450 A06 - View
Brassica napus C09p09940 C09 - View
Brassica napus A05p30920 A05 + View
Brassica oleracea BolC3t18413H C3 + View
Brassica rapa BraA06t26081Z A06 - View
Brassica rapa BraA05t21934Z A05 + View
Beta vulgaris EL10Ac1g01497 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr1_EL10_PGA_scaffold3 - View
Camellia sinensis var. sinensis CSS0011867 PREDICTED: U-box domain-containing protein 27-like [Nicotiana tomentosiformis] Chr9 + View
Cicer arietinum L. Ca_16924_v3 Ca_LG5_v3 + View
Cicer arietinum L. Ca_17651_v3 Ca_LG6_v3 - View
Corylus avellana Haze_25133 Similar to PUB28: U-box domain-containing protein 28 (Arabidopsis thaliana OX%3D3702) 8 - View
Coffea canephora Cc10_g14120 Putative U-box domain-containing protein 28 chr10 + View
Coffea canephora Cc07_g18560 Putative U-box domain-containing protein 26 chr7 - View
Coffea canephora Cc07_g17800 Putative U-box domain-containing protein 27 chr7 + View
Citrus clementina Ciclev10001380m.g scaffold_5 - View
Citrus clementina Ciclev10025637m.g scaffold_7 - View
Ceratophyllum demersum CDE08G1562 6 + View
Carpinus fangiana Cfa002836 Cfa01 - View
Cardamine hirsuta CARHR094080 U-box domain-containing protein Chr3 - View
Cardamine hirsuta CARHR278630 U-box domain-containing protein Chr8 - View
Carya illinoinensis CiPaw.15G018900 PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr15 - View
Carya illinoinensis CiPaw.03G127800 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr03 + View
Carya illinoinensis CiPaw.04G085900 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr04 + View
Citrullus lanatus ClCG01G015580 U-box domain-containing protein CG_Chr01 - View
Cucumis melo MELO3C008040.2 RING-type E3 ubiquitin transferase chr08 + View
Carica papaya Cpa.g.sc42.110 supercontig_42 + View
Chenopodium quinoa AUR62003612 PUB27: U-box domain-containing protein 27 C_Quinoa_Scaffold_2370 - View
Chenopodium quinoa AUR62017923 PUB27: U-box domain-containing protein 27 C_Quinoa_Scaffold_3086 - View
Chenopodium quinoa AUR62026750 PUB29: U-box domain-containing protein 29 C_Quinoa_Scaffold_2081 + View
Capsella rubella Carub.0006s0821 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED scaffold_6 - View
Capsella rubella Carub.0003s1848 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED scaffold_3 - View
Cucumis sativus L. CsaV3_6G041810 RING-type E3 ubiquitin transferase chr6 - View
Cucumis sativus L. CsaV3_2G018140 RING-type E3 ubiquitin transferase chr2 - View
Daucus carota DCAR_014421 hypothetical protein DCARv2_Chr4 + View
Davidia involucrata Dinv41104 GWHABJS00000002 - View
Davidia involucrata Dinv25838 GWHABJS00000011 - View
Davidia involucrata Dinv24314 GWHABJS00000012 + View
Davidia involucrata Dinv11330 GWHABJS00000014 + View
Durio zibethinus Duzib116G0041 NW_019167949.1 - View
Durio zibethinus Duzib264G1027 NW_019167960.1 + View
Durio zibethinus Duzib187G1115 NW_019167860.1 - View
Durio zibethinus Duzib147G0687 NW_019168470.1 - View
Eucalyptus grandis Eucgr.F02720 Chr06 + View
Eucalyptus grandis Eucgr.I00230 Chr09 - View
Eucalyptus grandis Eucgr.H04930 Chr08 + View
Eutrema salsugineum Thhalv10020785m.g PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED scaffold_13 + View
Eutrema salsugineum Thhalv10004299m.g PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED scaffold_6 + View
Fragaria x ananassa FAN23G0093 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb1-3 + View
Fragaria x ananassa FAN26G2567 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb1-2 + View
Fragaria x ananassa FAN19G1521 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb1-4 + View
Fragaria vesca FvH4_1g24000 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Fvb1 + View
Gossypium hirsutum Gohir.D02G071400 PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D02 + View
Gossypium hirsutum Gohir.D10G105900 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D10 + View
Gossypium hirsutum Gohir.D11G060000 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED D11 + View
Gossypium hirsutum Gohir.A02G065600 PTHR22849//PTHR22849:SF12 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED A02 + View
Gossypium hirsutum Gohir.A10G083514 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED A10 + View
Glycine max Glyma.06G151200 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Gm06 + View
Glycine max Glyma.05G189600 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Gm05 + View
Glycine max Glyma.08G147200 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Gm08 + View
Gossypium raimondii Gorai.007G064700 Chr07 + View
Gossypium raimondii Gorai.011G115700 Chr11 + View
Gossypium raimondii Gorai.005G080600 Chr05 + View
Lupinus albus Lalb_Chr12g0203261 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Lalb_Chr12 - View
Malus domestica MD01G1010900 CYS Chr01 + View
Malus domestica MD05G1020500 plant U-box 29 Chr05 + View
Manihot esculenta Manes.18G089700 Chromosome18 - View
Manihot esculenta Manes.02G176900 Chromosome02 - View
Manihot esculenta Manes.12G152200 Chromosome12 + View
Medicago truncatula Medtr8g092870 plant U-box protein chr8 + View
Medicago truncatula Medtr3g095730 plant U-box protein chr3 + View
Petunia axillaris Peaxi162Scf00012g00231 U-box domain-containing protein 27 Peaxi162Scf00012 - View
Petunia axillaris Peaxi162Scf00263g00104 U-box domain-containing protein 27 Peaxi162Scf00263 - View
Punica granatum PGR042G3401 NC_045130.1 + View
Punica granatum PGR102G1022 NC_045129.1 + View
Pisum sativum Psat5g063520 U-box domain chr5LG3 + View
Populus trichocarpa Potri.005G057500 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr05 + View
Populus trichocarpa Potri.007G110600 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr07 - View
Populus trichocarpa Potri.005G189800 PTHR22849//PTHR22849:SF52 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Chr05 - View
Populus trichocarpa Potri.002G070500 PTHR22849//PTHR22849:SF52 - WDSAM1 PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE PUB24-RELATED Chr02 + View
Phaseolus vulgaris Phvul.002G270300 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr02 + View
Phaseolus vulgaris Phvul.009G148200 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED Chr09 + View
Quercus lobata QL06p029766 6 - View
Rosa chinensis RcHm_v2.0_Chr2g0120131 RcHm_v2.0_Chr2 + View
Rhododendron simsii Rhsim10G0138500 chr10 - View
Rhododendron simsii Rhsim08G0002600 chr08 + View
Striga asiatica SGA_v2.0_scaffold48G17993 scaffold48 + View
Salix brachista Sabra05G0052900 GWHAAZH00000005 - View
Salix brachista Sabra05G0145000 GWHAAZH00000005 - View
Salix brachista Sabra07G0090500 GWHAAZH00000007 - View
Salix brachista Sabra05G0049400 GWHAAZH00000005 + View
Salix brachista Sabra07G0086000 GWHAAZH00000007 + View
Sechium edule Sed0008178 LG10 + View
Sechium edule Sed0026573 LG05 + View
Solanum lycopersicum Solyc04g071030.1 RING-type E3 ubiquitin transferase (AHRD V3.3 *** A0A2G2WYL4_CAPBA) SL4.0ch04 - View
Schrenkiella parvula Sp3g16770 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED ch3-1 - View
Schrenkiella parvula Sp2g27720 PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED ch2-4 - View
Solanum pennellii Sopen04g026970 ARM repeat superfamily protein | FUNCTIONS IN: ubiquitin-protein ligase activity, binding | INVOLVED IN: response to chitin | LOCATED IN: ubiquitin ligase complex | EXPRESSED IN: 10 plant structures | EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, 4 anthesis | CONTAINS InterPro DOMAIN/s: U box domain , Armadillo-like helical , Armadillo-type fold | BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 2 Spenn-ch04 - View
Solanum tuberosum PGSC0003DMG400025560 Photoperiod-response ST4.03ch11 - View
Solanum tuberosum PGSC0003DMG400000791 Photoperiod responsive protein ST4.03ch04 - View
Trochodendron aralioides TAR376G0047 group14 - View
Trochodendron aralioides TAR628G1731 group5 - View
Trochodendron aralioides TAR381G0450 group11 + View
Theobroma cacao Thecc.08G147400 Plant U-box 29 Chromosome_8 - View
Theobroma cacao Thecc.01G124800 CYS Chromosome_1 + View
Tarenaya hassleriana THA.LOC104818463 U-box domain-containing protein 27 NW_010966092.1 - View
Tarenaya hassleriana THA.LOC104799472 U-box domain-containing protein 27 NW_010960188.1 + View
Trifolium pratense TPR.G37415 Tp57577_TGAC_v2_LG3 + View
Tripterygium wilfordii TWI79G1625 NC_052238.1 - View
Tripterygium wilfordii TWI75G0086 NC_052253.1 + View
Vigna mungo VMungo1309G2205 CM024072.1 - View
Vigna mungo VMungo0251G2475 CM024069.1 + View
Vanilla planifolia HPP92_009306 U-box domain-containing family protein *** CM028153.1 - View
Vitis vinifera GSVIVG01026542001 chr4 + View
Zea mays Zm00001eb146830 Zm00001e019173 E3 ubiquitin-protein ligase PUB23 3 + View