Gene: AT5G09800

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G09800
  • Transcript Identifier AT5G09800.1
  • Gene Type Coding gene
  • Location Chr5 : 3043123-3044352 : negative

Gene Family Information

  • ID HOM05D000271
  • #Genes/#Species 1604/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G09800.1
  • uniprot Q9LXE3

Descriptions

  • Description ARM repeat superfamily protein
  • Computational description ARM repeat superfamily protein; FUNCTIONS IN: ubiquitin-protein ligase activity, binding; INVOLVED IN: response to chitin; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, LP.06 six leaves visible, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-like helical (InterPro:IPR011989), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: CYS, MET, PRO, and GLY protein 2 (TAIR:AT5G64660.1); Has 1911 Blast hits to 1878 proteins in 97 species: Archae - 0; Bacteria - 16; Metazoa - 84; Fungi - 4; Plants - 1697; Viruses - 0; Other Eukaryotes - 110 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IEA
Gene Ontologyprotein ubiquitination
GO:0016567
IEA
InterProprotein ubiquitination
GO:0010200
IEP
GOA Databaseresponse to chitin

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
Gene Ontologyubiquitin-protein transferase activity
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0005515
IPI
Gene Ontologyprotein binding1
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR003613 U box domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011989 Armadillo-like helical
Mapman id Description
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase