Gene: AT3G18710

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT3G18710
  • Transcript Identifier AT3G18710.1
  • Gene Type Coding gene
  • Location Chr3 : 6434234-6435481 : negative

Gene Family Information

  • ID HOM05D000271
  • #Genes/#Species 1604/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT3G18710.1
  • symbol PUB29
  • Alias ATPUB29,ARABIDOPSIS THALIANA PLANT U-BOX 29
  • uniprot Q9LSA6

Descriptions

  • Description plant U-box 29
  • Computational description plant U-box 29 (PUB29); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: response to chitin, protein ubiquitination; LOCATED IN: ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: U box domain (InterPro:IPR003613), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G09800.1); Has 1922 Blast hits to 1905 proteins in 98 species: Archae - 0; Bacteria - 12; Metazoa - 142; Fungi - 0; Plants - 1653; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016567
IDA
IEA
Gene Ontologyprotein ubiquitination1
GO:0016567
IEA
InterProprotein ubiquitination
GO:0010200
IEP
GOA Databaseresponse to chitin

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004842
IEA
GOA Databaseubiquitin-protein transferase activity
GO:0004842
IDA
Gene Ontologyubiquitin-protein transferase activity1
GO:0004842
IEA
InterProubiquitin-protein transferase activity
GO:0070696
IPI
Gene Ontologytransmembrane receptor protein serine/threonine kinase binding2
GO:0016740
IEA
GOA Databasetransferase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm
GO:0009506
IDA
GOA Databaseplasmodesma
GO:0009506
HDA
Gene Ontologyplasmodesma3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR011989 Armadillo-like helical
IPR003613 U box domain
IPR016024 Armadillo-type fold
Mapman id Description
19.2.2.1.4.2.2 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-III ligase